header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-991008-6
Gene Name: type I cytokeratin, enveloping layer
Gene Symbol: cyt1
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: krtt1c19c (1), wu:fa03a08, wu:fb34e10 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have structural molecule activity. Involved in cell migration involved in gastrulation. Predicted to localize to the intermediate filament. Human ortholog(s) of this gene implicated in  ...
GENE EXPRESSION
All Expression Data: 21 figures from 5 publications
Directly Submitted Expression Data: 12 figures (24 images) from Rauch et al., 2003 [fc04b06]
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16968 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29143 Point Mutation Unknown Premature Stop ENU
    sa36767 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH cyt1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cyt1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell migration involved in gastrulation (more)
    Cellular Component intermediate filament (more)
    Molecular Function structural molecule activity (more)
    GO Terms (all 3)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cyt1-201 (1) 1572
    aberrant processed transcript cyt1-202 (1) 787
    ncRNA ottdart00000016889 (1) 1663
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cyt1
    MARKER RELATIONSHIPS
    cyt1 Contained in: [BAC] DKEYP-113D7 (1)
    cyt1 Encodes: [EST] fb34e10 (1), fc04b06 (1) (order this)
    [cDNA] MGC:77350 (1) (order this)
    cyt1 Has Artifact: [EST] fa10g10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131107 (1) 1403 bp
    Genomic GenBank:BX323079 (1) 165200 bp
    Select Tool
    Polypeptide UniProtKB:Q9PWD8 (1) 429 aa
    Sequence Clusters UniGene:32651 (1)
    Sequence Information (all 21)
    ORTHOLOGY for cyt1 ( Chr: 19 )
    CITATIONS (35)