ZFIN ID: ZDB-GENE-991008-6
Gene Name: type I cytokeratin, enveloping layer
Gene Symbol: cyt1
Sequence Ontology ID : SO:0000704

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Previous Names: krtt1c19c (1), wu:fa03a08, wu:fb34e10 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have structural molecule activity; involved in cell migration involved in gastrulation; predicted to localize to the intermediate filament; orthologous to several human genes including  ...
GENE EXPRESSION
All Expression Data: 21 figures from 5 publications
Directly Submitted Expression Data: 12 figures (24 images) from Rauch et al., 2003 [fc04b06]
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16968 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29143 Point Mutation Unknown Premature Stop ENU
    sa36767 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. S1 from Pei et al., 2007
    Observed in:
    DISEASE ASSOCIATED WITH cyt1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cyt1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell migration involved in gastrulation (more)
    Cellular Component intermediate filament (more)
    Molecular Function structural molecule activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001664 (1)
  • InterPro:IPR002957 (1)
  • InterPro:IPR039008 (1)
  • PROSITE:PS51842 (1)
  • Pfam:PF00038 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cyt1-201 (1) 1572
    aberrant processed transcript cyt1-202 (1) 787
    ncRNA ottdart00000016889 (1) 1663
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cyt1
    MARKER RELATIONSHIPS
    cyt1Contained in: [BAC] DKEYP-113D7 (1)
    cyt1Encodes: [EST] fb34e10 (1), fc04b06 (1) (order this)
    [cDNA] MGC:77350 (1) (order this)
    cyt1Has Artifact: [EST] fa10g10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131107 (1) 1403bp
    Genomic GenBank:BX323079 (1) 165200bp
    Select Tool
    Polypeptide UniProtKB:Q9PWD8 (1) 429aa
    Sequence Clusters UniGene:32651 (1)
    Sequence Information (all 21)
    OTHER cyt1 GENE PAGES
  • Alliance (1)
  • Gene:30327 (1)
  • VEGA:OTTDARG00000014151 (1)
  • Ensembl(GRCz11):ENSDARG00000092947 (2)
  • ORTHOLOGY for cyt1 (Chr: 19)
    CITATIONS (35)