header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-990415-200
Gene Name: paired box 6a
Gene Symbol: pax6a
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: pax-a, Pax6.1, pax6, pax[zf-a] (1), paxzfa, zfpax-6a, cb280 (1), etID309716.25 (1), fc20e07, wu:fc20e07 (1), zfpax-6b

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Involved in several processes, including anterior/posterior pattern  ...
GENE EXPRESSION
All Expression Data: 203 figures from 150 publications
Directly Submitted Expression Data: 6 figures (19 images) from Thisse et al., 2001 [cb280]
  6 figures (15 images) from Thisse et al., 2005 [eu626]
Wild-type Stages, Structures: Gastrula:75%-epiboly (8.0h-9.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023151Tg Transgenic Insertion Unknown Unknown DNA
Targeting reagents:
DISEASE ASSOCIATED WITH pax6a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
aniridia Aniridia 106210
Cataract with late-onset corneal dystrophy 106210
autosomal dominant keratitis Keratitis 148190
coloboma ?Coloboma, ocular 120200
coloboma of optic nerve ?Coloboma of optic nerve 120430
?Morning glory disc anomaly 120430
Peters anomaly Anterior segment dysgenesis 5, multiple subtypes 604229
Foveal hypoplasia 1 136520
Optic nerve hypoplasia 165550
DISEASE ASSOCIATED WITH pax6a VIA EXPERIMENTAL MODELS No data available
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA pax6a-010 (1) 306
mRNA pax6a-201 (1) 876
pax6a-202 (1) 860
pax6a-203 (1) 1006
pax6a-204 (1) 2730
pax6a-205 (1) 2797
pax6a-206 (1) 933
pax6a-207 (1) 1922
pax6a-208 (1) 911
pax6a-210 (1) 699
 Withdrawn Transcriptsextinct
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES
PLASMIDS No data available
MARKER RELATIONSHIPS
pax6a Contained in: [BAC] DKEY-82I7 (1) (order this), DKEYP-46C10 (1)
pax6a Encodes: [EST] cb280 (1) (order this), eu626 (1), fc20e07 (1)
[cDNA] MGC:76866 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_131304 (1) 2809 bp
Genomic GenBank:AL929172 (1) 182666 bp
Select Tool
Polypeptide UniProtKB:A0A0R4IXU2 (1) 441 aa
Sequence Clusters UniGene:24244 (1)
Sequence Information (all 58)
ORTHOLOGY for pax6a ( Chr: 25 )
CITATIONS (307)