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ZIRC
ZFIN ID: ZDB-GENE-040426-1087
Gene Name: ADP-ribosylation factor-like 6 interacting protein 1
Gene Symbol: arl6ip1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: arl6ip (1), zgc:56593 (1), zgc:77873

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in neural crest cell migration and retina morphogenesis in camera-type eye; predicted to localize to the Sec61 translocon complex and integral component of membrane; orthologous to human  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028894Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH arl6ip1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    hereditary spastic paraplegia 61 ?Spastic paraplegia 61, autosomal recessive 615685
    DISEASE ASSOCIATED WITH arl6ip1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process neural crest cell development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function protein binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR033301 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA arl6ip1-003 (1) 781
    mRNA arl6ip1-201 (1) 1590
    arl6ip1-202 (1) 615
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arl6ip1 No data available
    MARKER RELATIONSHIPS
    arl6ip1Contained in: [BAC] DKEY-66I24 (1) (order this)
    arl6ip1Encodes: [EST] IMAGE:7140611 (1) (order this)
    [cDNA] MGC:56593 (1) (order this), MGC:77873 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201112 (1) 1545bp
    Genomic GenBank:BX004999 (1) 168839bp
    Select Tool
    Polypeptide UniProtKB:Q7ZWB4 (1) 203aa
    Sequence Clusters UniGene:1214 (1)
    Sequence Information (all 16)
    ORTHOLOGY for arl6ip1 (Chr: 3)
    CITATIONS (26)