ZFIN ID: ZDB-GENE-030131-579
Gene Name: RNA binding motif protein X-linked
Gene Symbol: rbmx
Sequence Ontology ID : SO:0000704

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Previous Names: fc66e11 (1), wu:fb37c07 (1), wu:fc66e11 (1)

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Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II proximal promoter sequence-specific DNA binding activity, chromatin binding activity, and mRNA binding activity; predicted to be involved in several processes,  ...
GENE EXPRESSION
All Expression Data: 12 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56625]
  9 figures (27 images) from Rauch et al., 2003 [cegs2567]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rbmx HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
syndromic X-linked intellectual disability Shashi type ?Mental retardation, X-linked, syndromic 11, Shashi type 300238
DISEASE ASSOCIATED WITH rbmx VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to interleukin-1 (more)
Cellular Component catalytic step 2 spliceosome (more)
Molecular Function chromatin binding (more)
GO Terms (all 22)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR003954 (1)
  • InterPro:IPR012604 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR035979 (1)
  • PROSITE:PS50102 (1)
  • Pfam:PF00076 (1)
  • Pfam:PF08081 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rbmx-003 (1) 1094
    rbmx-005 (1) 721
    mRNA rbmx-201 (1) 882
    rbmx-202 (1) 1560
    rbmx-203 (1) 888
    aberrant processed transcript rbmx-204 (1) 1145
    mRNA rbmx-207 (1) 386
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rbmx No data available
    MARKER RELATIONSHIPS
    rbmxContained in: [BAC] CH211-127L15 (1) (order this)
    rbmxEncodes: [EST] cegs2567 (1) (order this), fb37c07, fc66e11
    [cDNA] MGC:56625 (1) (order this), MGC:86631 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212598 (1) 1579bp
    Genomic GenBank:AL929434 (1) 178948bp
    Select Tool
    Polypeptide UniProtKB:Q7ZWA3 (1) 379aa
    Sequence Clusters UniGene:76840 (1)
    Sequence Information (all 35)
    OTHER rbmx GENE PAGES
  • Alliance (1)
  • Gene:321860 (1)
  • VEGA:OTTDARG00000021163 (1)
  • Ensembl(GRCz11):ENSDARG00000014244 (2)
  • ORTHOLOGY for rbmx (Chr: 14)
    CITATIONS (30)