ZFIN ID: ZDB-GENE-010702-1
Gene Name: LIM domain only 4a
Gene Symbol: lmo4a
Sequence Ontology ID : SO:0000704

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Previous Names: lmo4, id:ibd2576 (1), id:ibd5151 (1), NH13 (1)

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity; involved in embryonic camera-type eye development and forebrain development; orthologous to human LMO4 (LIM domain only 4).
GENE EXPRESSION
All Expression Data: 19 figures from 5 publications
Directly Submitted Expression Data: 4 figures (6 images) from Kudoh et al., 2001 [ibd5151]
  3 figures (7 images) from Kudoh et al., 2001 [ibd2576]
  7 figures (23 images) from Thisse et al., 2005 [eu232]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2205 Point Mutation Unknown Splice Site ENU
uob100 Small Deletion Unknown Frameshift, Premature Stop TALEN
Targeting reagents:
PHENOTYPE
Data: 7 figures from 3 publications
Observed in:
DISEASE ASSOCIATED WITH lmo4a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH lmo4a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process embryonic camera-type eye development (more)
Cellular Component cellular_component (more)
Molecular Function metal ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001781 (1)
  • PROSITE:PS00478 (1)
  • PROSITE:PS50023 (1)
  • Pfam:PF00412 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA lmo4a-002 (1) 615
    lmo4a-003 (1) 538
    mRNA lmo4a-201 (1) 1895
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lmo4a No data available
    MARKER RELATIONSHIPS
    lmo4aContained in: [BAC] DKEY-2N12 (1) (order this)
    lmo4aEncodes: [EST] eu232 (1), ibd2576 (1) (order this), ibd5151 (1) (order this)
    [cDNA] MGC:55192 (1) (order this), MGC:191201 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_177984 (1) 1927bp
    Genomic GenBank:CR855258 (1) 141618bp
    Select Tool
    Polypeptide UniProtKB:Q8QG63 (1) 167aa
    Sequence Clusters UniGene:107376 (1)
    Sequence Information (all 25)
    OTHER lmo4a GENE PAGES
  • Alliance (1)
  • Gene:114412 (1)
  • VEGA:OTTDARG00000018966 (1)
  • ORTHOLOGY for lmo4a (Chr: 5)
    CITATIONS (26)