ZFIN

ZFIN ID: ZDB-GENE-050420-170

ZFIN ID: ZDB-GENE-050420-170

CITATIONS (58 total)

Gene Name:	doublecortin-like kinase 2a
Gene Symbol:	dclk2a

Bernardello, M., Gualda, E.J., Loza-Alvarez, P. (2022) Modular multimodal platform for classical and high throughput light sheet microscopy. Scientific Reports. 12:1969

DeOliveira-Mello, L., Vicente, I., Gonzalez-Nunez, V., Santos-Ledo, A., Velasco, A., Arévalo, R., Lara, J.M., Mack, A.F. (2022) Doublecortin in the Fish Visual System, a Specific Protein of Maturing Neurons. Biology. 11(2):

Fasano, G., Muto, V., Radio, F.C., Venditti, M., Mosaddeghzadeh, N., Coppola, S., Paradisi, G., Zara, E., Bazgir, F., Ziegler, A., Chillemi, G., Bertuccini, L., Tinari, A., Vetro, A., Pantaleoni, F., Pizzi, S., Conti, L.A., Petrini, S., Bruselles, A., Prandi, I.G., Mancini, C., Chandramouli, B., Barth, M., Bris, C., Milani, D., Selicorni, A., Macchiaiolo, M., Gonfiantini, M.V., Bartuli, A., Mariani, R., Curry, C.J., Guerrini, R., Slavotinek, A., Iascone, M., Dallapiccola, B., Ahmadian, M.R., Lauri, A., Tartaglia, M. (2022) Dominant ARF3 variants disrupt Golgi integrity and cause a neurodevelopmental disorder recapitulated in zebrafish. Nature communications. 13:6841

Marsal, M., Bernardello, M., Gualda, E.J., Loza-Alvarez, P. (2022) Multiple asters organize the yolk microtubule network during dclk2-GFP zebrafish epiboly. Scientific Reports. 12:4072

Willekers, S., Tessadori, F., van der Vaart, B., Henning, H.H., Stucchi, R., Altelaar, M., Roelen, B.A.J., Akhmanova, A., Bakkers, J. (2022) The centriolar satellite protein Cfap53 facilitates formation of the zygotic microtubule organizing center in the zebrafish embryo. Development (Cambridge, England). 149(16)

Bernardello, M., Marsal, M., Gualda, E.J., Loza-Alvarez, P. (2021) Light-sheet fluorescence microscopy for the in vivo study of microtubule dynamics in the zebrafish embryo. Biomedical Optics Express. 12:6237-6254

Postlethwait, J.H., Massaquoi, M.S., Farnsworth, D.R., Yan, Y.L., Guillemin, K., Miller, A.C. (2021) The SARS-CoV-2 receptor and other key components of the Renin-Angiotensin-Aldosterone System related to COVID-19 are expressed in enterocytes in larval zebrafish. Biology Open. 10(3):

Willoughby, P.M., Allen, M., Yu, J., Korytnikov, R., Chen, T., Liu, Y., So, I., Macpherson, N., Mitchell, J.A., Fernandez-Gonzalez, R., Bruce, A.E.E. (2021) The recycling endosome protein Rab25 coordinates collective cell movements in the zebrafish surface epithelium. eLIFE. 10:

Postlethwait, J.H., Farnsworth, D.R., Miller, A.C. (2020) An intestinal cell type in zebrafish is the nexus for the SARS-CoV-2 receptor and the Renin-Angiotensin-Aldosterone System that contributes to COVID-19 comorbidities. ZFIN Direct Data Submission.

Rutherford, N.E., Wong, A.H., Bruce, A.E.E. (2019) Spatio-temporal characterization of dynamic epithelial filopodia during zebrafish epiboly. Developmental Dynamics : an official publication of the American Association of Anatomists. 248(10):997-1008

Shamipour, S., Kardos, R., Xue, S.L., Hof, B., Hannezo, E., Heisenberg, C.P. (2019) Bulk Actin Dynamics Drive Phase Segregation in Zebrafish Oocytes. Cell. 177(6):1463-1479.e18

Sun, Y., Zhang, B., Luo, L., Shi, D.L., Wang, H., Cui, Z., Huang, H., Cao, Y., Shu, X., Zhang, W., Zhou, J., Li, Y., Du, J., Zhao, Q., Chen, J., Zhong, H., Zhong, T.P., Li, L., Xiong, J.W., Peng, J., Xiao, W., Zhang, J., Yao, J., Yin, Z., Mo, X., Peng, G., Zhu, J., Chen, Y., Zhou, Y., Liu, D., Pan, W., Zhang, Y., Ruan, H., Liu, F., Zhu, Z., Meng, A., ZAKOC Consortium (2019) Systematic genome editing of the genes on zebrafish Chromosome 1 by CRISPR/Cas9. Genome research. 30(1):118-26

Chen, J., Castelvecchi, G.D., Li-Villarreal, N., Raught, B., Krezel, A.M., McNeill, H., Solnica-Krezel, L. (2018) Atypical Cadherin Dachsous1b Interacts with Ttc28 and Aurora B to Control Microtubule Dynamics in Embryonic Cleavages. Developmental Cell. 45:376-391.e5

Fei, Z., Bae, K., Parent, S.E., Wan, H., Goodwin, K., Theisen, U., Tanentzapf, G., Bruce, A.E.E. (2018) A cargo model of yolk syncytial nuclear migration during zebrafish epiboly. Development (Cambridge, England). 146(1):

Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613

Escobar-Aguirre, M., Zhang, H., Jamieson-Lucy, A., Mullins, M.C. (2017) Microtubule-actin crosslinking factor 1 (Macf1) domain function in Balbiani body dissociation and nuclear positioning. PLoS Genetics. 13:e1006983

Zheng, W., Wu, Y., Winter, P., Fischer, R., Nogare, D.D., Hong, A., McCormick, C., Christensen, R., Dempsey, W.P., Arnold, D.B., Zimmerberg, J., Chitnis, A., Sellers, J., Waterman, C., Shroff, H. (2017) Adaptive optics improves multiphoton super-resolution imaging. Nature Methods. 14(9):869-872

Elkouby, Y.M., Jamieson-Lucy, A., Mullins, M.C. (2016) Oocyte Polarization Is Coupled to the Chromosomal Bouquet, a Conserved Polarized Nuclear Configuration in Meiosis. PLoS Biology. 14:e1002335

Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549

Li-Villarreal, N., Forbes, M.M., Loza, A.J., Chen, J., Ma, T., Helde, K., Moens, C.B., Shin, J., Sawada, A., Hindes, A.E., Dubrulle, J., Schier, A.F., Longmore, G.D., Marlow, F.L., Solnica-Krezel, L. (2015) Dachsous1b cadherin regulates actin and microtubule cytoskeleton during early zebrafish embryogenesis. Development (Cambridge, England). 142(15):2704-18

Nagamine, T., Nomada, S., Onouchi, T., Kameshita, I., Sueyoshi, N. (2014) Nuclear translocation of doublecortin-like protein kinase and phosphorylation of a transcription factor JDP2. Biochemical and Biophysical Research Communications. 446:73-8

Vacaru, A.M., Unlu, G., Spitzner, M., Mione, M., Knapik, E.W., and Sadler, K.C. (2014) In vivo cell biology in zebrafish - providing insights into vertebrate development and disease. Journal of Cell Science. 127(Pt 3):485-495

Winter, P.W., York, A.G., Nogare, D.D., Ingaramo, M., Christensen, R., Chitnis, A., Patterson, G.H., Shroff, H. (2014) Two-photon instant structured illumination microscopy improves the depth penetration of super-resolution imaging in thick scattering samples. Optica. 1:181-191

York, A.G., Chandris, P., Nogare, D.D., Head, J., Wawrzusin, P., Fischer, R.S., Chitnis, A., and Shroff, H. (2013) Instant super-resolution imaging in live cells and embryos via analog image processing. Nature Methods. 10(11):1122-1126

Behrndt, M., Salbreux, G., Campinho, P., Hauschild, R., Oswald, F., Roensch, J., Grill, S.W., and Heisenberg, C.P. (2012) Forces driving epithelial spreading in zebrafish gastrulation. Science (New York, N.Y.). 338(6104):257-260

Gupta, A., Christensen, R.G., Rayla, A.L., Lakshmanan, A., Stormo, G.D., and Wolfe, S.A. (2012) An optimized two-finger archive for ZFN-mediated gene targeting. Nature Methods. 9(6):588-590

Terzibasi Tozzini, E., Baumgart, M., Battistoni, G., and Cellerino, A. (2012) Adult neurogenesis in the short-lived teleost Nothobranchius furzeri: localization of neurogenic niches, molecular characterization and effects of aging. Aging Cell. 11(2):241-251

Tran, L.D., Hino, H., Quach, H., Lim, S., Shindo, A., Mimori-Kiyosue, Y., Mione, M., Ueno, N., Winkler, C., Hibi, M., and Sampath, K. (2012) Dynamic microtubules at the vegetal cortex predict the embryonic axis in zebrafish. Development (Cambridge, England). 139(19):3644-3652

York, A.G., Parekh, S.H., Nogare, D.D., Fischer, R.S., Temprine, K., Mione, M., Chitnis, A.B., Combs, C.A., and Shroff, H. (2012) Resolution doubling in live, multicellular organisms via multifocal structured illumination microscopy. Nature Methods. 9(7):749-754

Nagamine, T., Shimomura, S., Sueyoshi, N., and Kameshita, I. (2011) Influence of Ser/Pro-rich domain and kinase domain of doublecortin-like protein kinase on microtubule-binding activity. Journal of biochemistry. 149(5):619-627

Sepich, D.S., Usmani, M., Pawlicki, S., and Solnica-Krezel, L. (2011) Wnt/PCP signaling controls intracellular position of MTOCs during gastrulation convergence and extension movements. Development (Cambridge, England). 138(3):543-552

Shimomura, S., Nagamine, T., Hatano, N., Sueyoshi, N., and Kameshita, I. (2010) Identification of an endogenous substrate of zebrafish doublecortin-like protein kinase using a highly active truncation mutant. Journal of biochemistry. 147(5):711-722

Shimomura, S., Nagamine, T., Nimura, T., Sueyoshi, N., Shigeri, Y., and Kameshita, I. (2007) Expression, characterization, and gene knockdown of zebrafish doublecortin-like protein kinase. Archives of biochemistry and biophysics. 463(2):218-230

Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903

Additional Citations (24):

ZFIN Staff (2024) Association of Ensembl transcripts with ZFIN genes. Semi-automated Curation.

ZFIN Staff (2023) Automated Curation of UniProt Database Links. Automated Data Submission.

ZFIN Staff (2022) Electronic Gene Ontology annotations created by ARBA machine learning models. Automated Data Submission.

ZFIN Staff (2020) Addition of links from ZFIN to Expression Atlas. Semi-automated Curation.

ZFIN Staff (2017) Curation of PANTHER Gene IDs. Automated Data Submission.

ZFIN Staff (2017) Curation of Alliance of Genome Resources Database Links. Automated Data Submission.

UniProt curators (2015) Electronic Gene Ontology annotations created by transferring manual GO annotations between related proteins based on shared sequence features.. Automated Data Submission.

Busch-Nentwich, E., Kettleborough, R., Dooley, C. M., Scahill, C., Sealy, I., White, R., Herd, C., Mehroke, S., Wali, N., Carruthers, S., Hall, A., Collins, J., Gibbons, R., Pusztai, Z., Clark, R., and Stemple, D.L. (2013) Sanger Institute Zebrafish Mutation Project mutant data submission. ZFIN Direct Data Submission.

ZFIN Staff (2013) Semi-automated association of ENSDARG identifiers with ZFIN genes for the ZMP project. Semi-automated Curation.

Burgess, S., and Lin, S. (2011) Viral Insertion Mutants. ZFIN Direct Data Submission.

UniProt-GOA (2011) Gene Ontology annotation based on the automatic assignment of UniProtKB Subcellular Location terms in UniProtKB/TrEMBL entries. Manually curated data.

Gaudet, P., Livstone, M., Thomas, P., The Reference Genome Project (2010) Annotation inferences using phylogenetic trees. Automated Data Submission.

ZIRC and ZFIN staff (2009) Mutant and Transgenic Line Submissions 2009. ZFIN Direct Data Submission.

ZFIN Staff (2006) Curation of Ensembl Database Links. Automated Data Submission.

ZFIN Staff (2004) ZGC Data Curation and Association in ZFIN by ZFIN Staff. Semi-automated Curation.

ZFIN Staff (2003) Curation of VEGA Database Links. Automated Data Submission.

ZFIN Staff (2003) Curation of orthology data. Manually curated data.

ZFIN Staff (2003) Gene Ontology Annotation Through Association of Enzyme Commission numbers with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Gene Ontology Annotation Through Association of UniProt Keywords with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Curation of NCBI Gene Data Via Shared RNA Sequence IDs. Automated Data Submission.

ZFIN Staff (2002) Scientific Curation. Manually curated data.

ZFIN Staff (2002) Gene Ontology Annotation Through Association of InterPro Records with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Curation of EMBL records. Automated Data Submission.

Thisse, B., Pflumio, S., Fürthauer, M., Loppin, B., Heyer, V., Degrave, A., Woehl, R., Lux, A., Steffan, T., Charbonnier, X.Q. and Thisse, C. (2001) Expression of the zebrafish genome during embryogenesis (NIH R01 RR15402). ZFIN Direct Data Submission.