ZFIN

ZFIN ID: ZDB-GENE-050106-1

ZFIN ID: ZDB-GENE-050106-1

CITATIONS (50 total)

Gene Name:	transient receptor potential cation channel, subfamily A, member 1b
Gene Symbol:	trpa1b

Bellantoni, E., Marini, M., Chieca, M., Gabellini, C., Crapanzano, E.L., Souza Monteiro de Araujo, D., Nosi, D., Roschi, L., Landini, L., De Siena, G., Pensieri, P., Mastricci, A., Scuffi, I., Geppetti, P., Nassini, R., De Logu, F. (2024) Schwann cell transient receptor potential ankyrin 1 (TRPA1) ortholog in zebrafish larvae mediates chemotherapy-induced peripheral neuropathy. British journal of pharmacology. 181(23):4859-4873

Han, Y., Sun, K., Yu, S., Qin, Y., Zhang, Z., Luo, J., Hu, H., Dai, L., Cui, M., Jiang, C., Liu, F., Huang, Y., Gao, P., Chen, X., Xin, T., Ren, X., Wu, X., Song, J., Wang, Q., Tang, Z., Chen, J., Zhang, H., Zhang, X., Liu, M., Luo, D. (2024) A Mettl16/m⁶A/mybl2b/Igf2bp1 axis ensures cell cycle progression of embryonic hematopoietic stem and progenitor cells. The EMBO journal. 43(10):1990-2014

Son, H.W., Ali, D.W. (2022) Endocannabinoid Receptor Expression in Early Zebrafish Development. Developmental neuroscience. 44(3):142-152

Jeong, I., Yun, S., Shahapal, A., Cho, E.B., Hwang, S.W., Seong, J.Y., Park, H.C. (2021) FAM19A5l Affects Mustard Oil-Induced Peripheral Nociception in Zebrafish. Molecular neurobiology. 58(9):4770-4785

Kroll, F., Powell, G.T., Ghosh, M., Gestri, G., Antinucci, P., Hearn, T.J., Tunbak, H., Lim, S., Dennis, H.W., Fernandez, J.M., Whitmore, D., Dreosti, E., Wilson, S.W., Hoffman, E.J., Rihel, J. (2021) A simple and effective F0 knockout method for rapid screening of behaviour and other complex phenotypes. eLIFE. 10:

Parvez, S., Herdman, C., Beerens, M., Chakraborti, K., Harmer, Z.P., Yeh, J.J., MacRae, C.A., Yost, H.J., Peterson, R.T. (2021) MIC-Drop: A platform for large-scale in vivo CRISPR screens. Science (New York, N.Y.). 373(6559):1146-1151

Takahashi, S., Kurogi, M., Saitoh, O. (2021) The diversity in sensitivity of TRPA1 and TRPV1 of various animals to polyphenols. Biomedical research (Tokyo, Japan). 42:43-51

Lam, P.Y., Thawani, A.R., Balderas, E., White, A.J.P., Chaudhuri, D., Fuchter, M.J., Peterson, R. (2020) TRPswitch - a step function chemo-optogenetic ligand for the vertebrate TRPA1 channel. Journal of the American Chemical Society. 142(41):17457-17468

Ye, L., Bae, M., Cassilly, C.D., Jabba, S.V., Thorpe, D.W., Martin, A.M., Lu, H.Y., Wang, J., Thompson, J.D., Lickwar, C.R., Poss, K.D., Keating, D.J., Jordt, S.E., Clardy, J., Liddle, R.A., Rawls, J.F. (2020) Enteroendocrine cells sense bacterial tryptophan catabolites to activate enteric and vagal neuronal pathways. Cell Host & Microbe. 29(2):179-196.e9

You, M.S., Yang, W.B., Cheng, C.H., Yu, S., Chang, H.C., Yu, H.S. (2020) Red LED light treatment promotes cognitive learning through up-regulation of trpm4 in zebrafish. Journal of photochemistry and photobiology. B, Biology. 213:112073

Ko, M.J., Ganzen, L.C., Coskun, E., Mukadam, A.A., Leung, Y.F., van Rijn, R.M. (2019) A critical evaluation of TRPA1-mediated locomotor behavior in zebrafish as a screening tool for novel anti-nociceptive drug discovery. Scientific Reports. 9:2430

Esancy, K., Condon, L., Feng, J., Kimball, C., Curtright, A., Dhaka, A. (2018) A zebrafish and mouse model for selective pruritus via direct activation of TRPA1. eLIFE. 7

Gau, P., Curtright, A., Condon, L., Raible, D.W., Dhaka, A. (2017) An ancient neurotrophin receptor code; a single Runx/Cbfβ complex determines somatosensory neuron fate specification in zebrafish. PLoS Genetics. 13:e1006884

Jerônimo, R., Moraes, M.N., de Assis, L.V.M., Ramos, B.C., Rocha, T., Castrucci, A.M.L. (2017) Thermal stress in Danio rerio: a link between temperature, light, thermo-TRP channels, and clock genes. Journal of thermal biology. 68:128-138

Lam, P.Y., Mendu, S.K., Mills, R.W., Zheng, B., Padilla, H., Milan, D.J., Desai, B.N., Peterson, R.T. (2017) A high-conductance chemo-optogenetic system based on the vertebrate channel Trpa1b. Scientific Reports. 7:11839

Lindström, J.B., Pierce, N.T., Latz, M.I. (2017) Role of TRP Channels in Dinoflagellate Mechanotransduction. The Biological bulletin. 233:151-167

Oda, M., Saito, K., Hatta, S., Kubo, Y., Saitoh, O. (2017) Chemical and thermal sensitivity of medaka TRPA1 analyzed in heterologous expression system. Biochemical and Biophysical Research Communications. 494(1-2):194-201

Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. (2016) The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48(4):427-37

Gupta, R., Saito, S., Mori, Y., Itoh, S.G., Okumura, H., Tominaga, M. (2016) Structural basis of TRPA1 inhibition by HC-030031 utilizing species-specific differences. Scientific Reports. 6:37460

Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549

Faucherre, A., Nargeot, J., Mangoni, M.E., and Jopling, C. (2013) piezo2b Regulates Vertebrate Light Touch Response. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(43):17089-17094

Gau, P., Poon, J., Ufret-Vincenty, C., Snelson, C.D., Gordon, S.E., Raible, D.W., and Dhaka, A. (2013) The Zebrafish Ortholog of TRPV1 Is Required for Heat-Induced Locomotion. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(12):5249-5260

Graham, D.M., Huang, L., Robinson, K.R., and Messerli, M.A. (2013) Epidermal keratinocyte polarity and motility require Ca²⁺ influx through TRPV1. Journal of Cell Science. 126(Pt 20):4602-13

Klee, E.W., Schneider, H., Clark, K.J., Cousin, M.A., Ebbert, J.O., Hooten, W.M., Karpyak, V.M., Warner, D.O., and Ekker, S.C. (2012) Zebrafish: a model for the study of addiction genetics. Human genetics. 131(6):977-1008

Motter, A.L., and Ahern, G.P. (2012) TRPA1 Is a Polyunsaturated Fatty Acid Sensor in Mammals. PLoS One. 7(6):e38439

Pan, Y.A., Choy, M., Prober, D.A., and Schier, A.F. (2012) Robo2 determines subtype-specific axonal projections of trigeminal sensory neurons. Development (Cambridge, England). 139(3):591-600

Caron, S.J., Prober, D., Choy, M., and Schier, A.F. (2008) In vivo birthdating by BAPTISM reveals that trigeminal sensory neuron diversity depends on early neurogenesis. Development (Cambridge, England). 135(19):3259-3269

Prober, D.A., Zimmerman, S., Myers, B.R., McDermott, B.M. Jr, Kim, S.H., Caron, S., Rihel, J., Solnica-Krezel, L., Julius, D., Hudspeth, A.J., and Schier, A.F. (2008) Zebrafish TRPA1 channels are required for chemosensation but not for thermosensation or mechanosensory hair cell function. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28(40):10102-10110

McPartland, J.M., Glass, M., Matias, I., Norris, R.W., and Kilpatrick, C.W. (2007) A shifted repertoire of endocannabinoid genes in the zebrafish (Danio rerio). Molecular genetics and genomics : MGG. 277(5):555-570

Saito, S., and Shingai, R. (2006) Evolution of thermoTRP ion channel homologs in vertebrates. Physiological Genomics. 27(3):219-230

Corey, D.P., García-Añoveros, J., Holt, J.R., Kwan, K.Y., Lin, S.Y., Vollrath, M.A., Amalfitano, A., Cheung, E.L., Derfler, B.H., Duggan, A., Géléoc, G.S., Gray, P.A., Hoffman, M.P., Rehm, H.L., Tamasauskas, D., Zhang, D.S. (2004) TRPA1 is a candidate for the mechanosensitive transduction channel of vertebrate hair cells. Nature. 432(7018):723-730

Additional Citations (19):

ZFIN Staff (2024) Association of Ensembl transcripts with ZFIN genes. Semi-automated Curation.

ZFIN Staff (2023) Automated Curation of UniProt Database Links. Automated Data Submission.

ZFIN Staff (2020) Addition of links from ZFIN to Expression Atlas. Semi-automated Curation.

ZFIN Staff (2019) Analysis of data directly submitted to the Zebrafish International Resource Center (ZIRC). ZFIN Direct Data Submission.

ZFIN Staff (2017) Curation of PANTHER Gene IDs. Automated Data Submission.

ZFIN Staff (2017) Curation of Alliance of Genome Resources Database Links. Automated Data Submission.

ZFIN Staff (2015) Data Model Change: Sequence Targeting Reagents Removed from Environment. ZFIN Historical Data.

Busch-Nentwich, E., Kettleborough, R., Dooley, C. M., Scahill, C., Sealy, I., White, R., Herd, C., Mehroke, S., Wali, N., Carruthers, S., Hall, A., Collins, J., Gibbons, R., Pusztai, Z., Clark, R., and Stemple, D.L. (2013) Sanger Institute Zebrafish Mutation Project mutant data submission. ZFIN Direct Data Submission.

ZFIN Staff (2013) Semi-automated association of ENSDARG identifiers with ZFIN genes for the ZMP project. Semi-automated Curation.

ZIRC and ZFIN staff (2012) Mutant and Transgenic Line Submissions 2012. ZFIN Direct Data Submission.

UniProt-GOA (2011) Gene Ontology annotation based on the automatic assignment of UniProtKB Subcellular Location terms in UniProtKB/TrEMBL entries. Manually curated data.

ZFIN Staff (2006) Curation of Ensembl Database Links. Automated Data Submission.

Zebrafish Nomenclature Committee (2003) Nomenclature Data Curation (2003-2010). Nomenclature Committee Submission.

ZFIN Staff (2003) Curation of VEGA Database Links. Automated Data Submission.

ZFIN Staff (2003) Curation of orthology data. Manually curated data.

ZFIN Staff (2002) Gene Ontology Annotation Through Association of UniProt Keywords with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Curation of NCBI Gene Data Via Shared RNA Sequence IDs. Automated Data Submission.

ZFIN Staff (2002) Scientific Curation. Manually curated data.

ZFIN Staff (2002) Gene Ontology Annotation Through Association of InterPro Records with GO Terms. Automated Data Submission.