ZFIN

ZFIN ID: ZDB-GENE-041010-5

ZFIN ID: ZDB-GENE-041010-5

CITATIONS (57 total)

Gene Name:	parkinson protein 7
Gene Symbol:	park7

Rostad, K.O., Trognitz, T., Frøyset, A.K., Bifulco, E., Fladmark, K.E. (2024) Accelerated Sarcopenia Phenotype in the DJ-1/Park7-Knockout Zebrafish. Antioxidants (Basel, Switzerland). 13(12):

Zheng, N., Liao, T., Zhang, C., Zhang, Z., Yan, S., Xi, X., Ruan, F., Yang, C., Zhao, Q., Deng, W., Huang, J., Huang, Z.T., Chen, Z.F., Wang, X., Qu, Q., Zuo, Z., He, C. (2024) Quantum Dots-caused Retinal Degeneration in Zebrafish Regulated by Ferroptosis and Mitophagy in Retinal Pigment Epithelial Cells through Inhibiting Spliceosome. Advanced science (Weinheim, Baden-Wurttemberg, Germany). 11(46):e2406343

Cansiz, D., Unal, I., Beler, M., Ustundag, U.V., Ak, E., Emekli-Alturfan, E., Alturfan, A.A. (2023) The Effect of Acetic Acid-Induced Pain in Parkinson's Disease Model in Zebrafish. Neurotoxicology. 99:14-23

Khalili, A., Safarian, N., van Wijngaarden, E., Zoidl, G.S., Zoidl, G.R., Rezai, P. (2023) Loss of Panx1 function in zebrafish alters motor behavior in a lab-on-chip model of Parkinson's disease. Journal of neuroscience research. 101(12):1814-1825

Nakamae, K., Bono, H. (2023) DANGER analysis: risk-averse on/off-target assessment for CRISPR editing without a reference genome. Bioinformatics advances. 3:vbad114vbad114

Moran, A.L., Carter, S.P., Kaylor, J.J., Jiang, Z., Broekman, S., Dillon, E.T., Gómez Sánchez, A., Minhas, S.K., van Wijk, E., Radu, R.A., Travis, G.H., Carey, M., Blacque, O.E., Kennedy, B.N. (2022) Dawn and dusk peaks of outer segment phagocytosis, and visual cycle function require Rab28. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 36:e22309

Ünal, İ., Cansız, D., Sürmen, M.G., Sürmen, S., Sezer, Z., Beler, M., Üstündağ, Ü.V., Güzel, E., Alturfan, A.A., Emekli-Alturfan, E. (2022) Identification of Molecular Network of Gut-Brain Axis Associated with Neuroprotective Effects of PPARδ-Ligand Erucic Acid in Rotenone-Induced Parkinson's Disease Model in Zebrafish. The European journal of neuroscience. 57(4):585-606

Üstündağ, F.D., Ünal, İ., Üstündağ, Ü.V., Cansız, D., Beler, M., Karagöz, A., Kara Subaşat, H., Alturfan, A.A., Mega Tiber, P., Emekli-Alturfan, E. (2022) 3-Pyridinylboronic Acid Ameliorates Rotenone-Induced Oxidative Stress Through Nrf2 Target Genes in Zebrafish Embryos. Neurochemical research. 47(6):1553-1564

Gharbi, N., Røise, D., Førre, J.E., Edson, A.J., Hushagen, H.A., Tronci, V., Frøyset, A.K., Fladmark, K.E. (2021) Reintroduction of DJ-1 in Müller Cells Inhibits Retinal Degeneration in the DJ-1 Deficient Retina. Antioxidants (Basel, Switzerland). 10(12):

Ji, X., Wang, B., Paudel, Y.N., Li, Z., Zhang, S., Mou, L., Liu, K., Jin, M. (2021) Protective Effect of Chlorogenic Acid and Its Analogues on Lead-Induced Developmental Neurotoxicity Through Modulating Oxidative Stress and Autophagy. Frontiers in molecular biosciences. 8:655549

Li, Z., Cao, P., Meng, H., Li, D., Zhang, Y., Li, Y., Wang, S. (2021) Long-term exposure to 2-amino-3-methylimidazo[4,5-f]quinoline can trigger a potential risk of Parkinson's disease. Journal of hazardous materials. 412:125230

Cao, Z., Su, M., Wang, H., Zhou, L., Meng, Z., Xiong, G., Liao, X., Lu, H. (2020) Carboxyl graphene oxide nanoparticles induce neurodevelopmental defects and locomotor disorders in zebrafish larvae. Chemosphere. 270:128611

Hughes, G.L., Lones, M.A., Bedder, M., Currie, P.D., Smith, S.L., Pownall, M.E. (2020) Machine learning discriminates a movement disorder in a zebrafish model of Parkinson's disease. Disease models & mechanisms. 13(10):

Kooij, R., Liu, S., Sapmaz, A., Xin, B.T., Janssen, G.M.C., van Veelen, P.A., Ovaa, H., Ten Dijke, P., Geurink, P.P. (2020) A Small-Molecule Activity-Based Probe for Monitoring Ubiquitin C-terminal Hydrolase L1 (UCHL1) Activity in Live Cells and Zebrafish Embryos. Journal of the American Chemical Society. 142(39):16825-16841

Zhang, S., Yu, Z., Xia, J., Zhang, X., Liu, K., Sik, A., Jin, M. (2020) Anti-Parkinson's disease activity of phenolic acids from Eucommia ulmoides Oliver leaf extracts and their autophagy activation mechanism. Food & function. 11(2):1425-1440

Edson, A.J., Hushagen, H.A., Frøyset, A.K., Elda, I., Khan, E.A., Di Stefano, A., Fladmark, K.E. (2019) Dysregulation in the Brain Protein Profile of Zebrafish Lacking the Parkinson's Disease-Related Protein DJ-1. Molecular neurobiology. 56(12):8306-8322

Li, X., Ji, X., Wang, R., Zhao, J., Dang, J., Gao, Y., Jin, M. (2019) Zebrafish behavioral phenomics employed for characterizing behavioral neurotoxicity caused by silica nanoparticles. Chemosphere. 240:124937

Moriya, S., Tan, V.P., Yee, A.K., Parhar, I.S. (2019) pink1, atp13a2 and uchl1 Expressions Are Affected by Inflammation in the Brain. Neuroscience letters. 708:134330

Ünal, İ., Çalışkan-Ak, E., Üstündağ, Ü.V., Ateş, P.S., Alturfan, A.A., Altinoz, M.A., Elmaci, I., Emekli-Alturfan, E. (2019) Neuroprotective Effects of Mitoquinone and Oleandrin on Parkinson's Disease Model in Zebrafish. The International journal of neuroscience. 130(6):574-582

Frøyset, A.K., Edson, A.J., Gharbi, N., Khan, E.A., Dondorp, D., Bai, Q., Tiraboschi, E., Suster, M.L., Connolly, J.B., Burton, E.A., Fladmark, K.E. (2018) Astroglial DJ-1 over-expression up-regulates proteins involved in redox regulation and is neuroprotective in vivo. Redox Biology. 16:237-247

Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613

Cortelazzo, A., Pietri, T., De Felice, C., Leoncini, S., Guerranti, R., Signorini, C., Timperio, A.M., Zolla, L., Ciccoli, L., Hayek, J. (2017) Proteomic analysis of the Rett syndrome experimental model mecp2^Q63X mutant zebrafish.. Journal of proteomics. 154:128-133

Wang, Y., Liu, W., Yang, J., Wang, F., Yizhen, S., Zhong, Z.M., Wang, H., Hu, L.F., Liu, C.F. (2017) Parkinson's disease-like motor and non-motor symptoms in rotenone-treated zebrafish. Neurotoxicology. 58:103-109

Babu, N.S., Murthy, C.L., Kakara, S., Sharma, R., Swamy, C.V., Idris, M.M. (2016) MPTP induced Parkinson's disease in zebrafish. Proteomics. 16(9):1407-20

Díaz-Casado, M.E., Lima, E., García, J.A., Doerrier, C., Aranda, P., Sayed, R.K., Guerra-Librero, A., G Escames, G., López, L.C., Acuña-Castroviejo, D. (2016) Melatonin rescues zebrafish embryos from the parkinsonian phenotype restoring the Parkin/PINK1/DJ-1/MUL1 network. Journal of pineal research. 61(1):96-107

Gao, D., Wu, M., Wang, C., Wang, Y., Zuo, Z. (2015) Chronic exposure to low benzo[a]pyrene level causes neurodegenerative disease-like syndromes in zebrafish (Danio rerio). Aquatic toxicology (Amsterdam, Netherlands). 167:200-208

Huang, T.C., and Chen, J.Y. (2013) Proteomic and functional analysis of zebrafish after administration of antimicrobial peptide epinecidin-1. Fish & shellfish immunology. 34(2):593-598

Yang, H., Zhou, Y., Gu, J., Xie, S., Xu, Y., Zhu, G., Wang, L., Huang, J., Ma, H., and Yao, J. (2013) Deep mRNA sequencing analysis to capture the transcriptome landscape of zebrafish embryos and larvae. PLoS One. 8(5):e64058

Milanese, C., Sager, J.J., Bai, Q., Farrell, T.C., Cannon, J.R., Greenamyre, J.T., and Burton, E.A. (2012) Hypokinesia and reduced dopamine levels in zebrafish lacking beta- and gamma1-synucleins. The Journal of biological chemistry. 287(5):2971-2983

Bretaud, S., Macraild, S., Ingham, P.W., and Bandmann, O. (2011) The Influence of the Zebrafish Genetic Background on Parkinson's Disease-Related Aspects. Zebrafish. 8(3):103-8

Hu, Z., Zhang, J., and Zhang, Q. (2011) Expression pattern and functions of autophagy-related gene atg5 in zebrafish organogenesis. Autophagy. 7(12):1514-1527

Baulac, S., Lu, H., Strahle, J., Yang, T., Goldberg, M.S., Shen, J., Schlossmacher, M.G., Lemere, C.A., Lu, Q., and Xia, W. (2009) Increased DJ-1 Expression under Oxidative Stress and in Alzheimer's Disease Brains. Molecular neurodegeneration. 4:12

Bretaud, S., Allen, C., Ingham, P.W., and Bandmann, O. (2007) p53-dependent neuronal cell death in a DJ-1-deficient zebrafish model of Parkinson's disease. Journal of neurochemistry. 100(6):1626-1635

Bai, Q., Mullett, S.J., Garver, J.A., Hinkle, D.A., and Burton, E.A. (2006) Zebrafish DJ-1 is evolutionarily conserved and expressed in dopaminergic neurons. Brain research. 1113(1):33-44

Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903

Additional Citations (22):

ZFIN Staff (2024) Association of Ensembl transcripts with ZFIN genes. Semi-automated Curation.

ZFIN Staff (2023) Automated Curation of UniProt Database Links. Automated Data Submission.

ZFIN Staff (2022) Electronic Gene Ontology annotations created by ARBA machine learning models. Automated Data Submission.

Zebrafish Nomenclature Committee (2020) Nomenclature Data Curation (2020). Nomenclature Committee Submission.

ZFIN Staff (2020) Addition of links from ZFIN to Expression Atlas. Semi-automated Curation.

ZFIN Staff (2017) Curation of PANTHER Gene IDs. Automated Data Submission.

ZFIN Staff (2017) Curation of Alliance of Genome Resources Database Links. Automated Data Submission.

ZFIN Staff (2013) Semi-automated association of ENSDARG identifiers with ZFIN genes for the ZMP project. Semi-automated Curation.

UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. Manually curated data.

UniProt-GOA (2011) Gene Ontology annotation based on the automatic assignment of UniProtKB Subcellular Location terms in UniProtKB/TrEMBL entries. Manually curated data.

Gaudet, P., Livstone, M., Thomas, P., The Reference Genome Project (2010) Annotation inferences using phylogenetic trees. Automated Data Submission.

GOA, HGNC, AgBase and UniProtKB curators (2007) Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity. ZFIN Direct Data Submission.

ZFIN Staff (2007) Microarray Expression to Gene Association in ZFIN. Semi-automated Curation.

Ensembl curators, GOA curators (2006) Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara. Manually curated data.

ZFIN Staff (2006) Curation of Ensembl Database Links. Automated Data Submission.

Thisse, B., Thisse, C. (2004) Fast Release Clones: A High Throughput Expression Analysis. ZFIN Direct Data Submission.

ZFIN Staff (2004) ZGC Data Curation and Association in ZFIN by ZFIN Staff. Semi-automated Curation.

ZFIN Staff (2003) Curation of VEGA Database Links. Automated Data Submission.

ZFIN Staff (2003) Curation of orthology data. Manually curated data.

ZFIN Staff (2003) Gene Ontology Annotation Through Association of Enzyme Commission numbers with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Gene Ontology Annotation Through Association of UniProt Keywords with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Curation of NCBI Gene Data Via Shared RNA Sequence IDs. Automated Data Submission.