ZFIN ID: ZDB-GENE-000502-1

Mapping Details

Gene Name: bone morphogenetic protein receptor, type IAa
Symbol: bmpr1aa
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 13 25,703,321 - 25,767,330 GRCz12tu
NCBI Map Viewer 13 25,703,321 - 25,767,330 GRCz12tu
Ensembl 13 22,555,791 - 22,619,790 GRCz11
NCBI Map Viewer 13 22,555,791 - 22,619,802 GRCz11
UCSC 13 - GRCz11
Vega 13 22,425,341 - 22,489,340 GRCv10
Mapped Clones containing bmpr1aa
DKEY-230G10 Chr: 13 Details
CH211-134M17 Chr: 13 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
hu4087 13 22,615,424 GRCz11 DIRECT Smith et al., 2011
p3 13 22,614,468 - 22,614,520 GRCz11 DIRECT Zebrafish Nomenclature Committee
sa8457 13 25,760,841 GRCz12tu DIRECT Sealy et al., 2025
13 22,613,313 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 22,482,863 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 22,753,525 Zv9 DIRECT Busch-Nentwich et al., 2013
sa44785 13 25,762,077 GRCz12tu DIRECT Sealy et al., 2025
13 22,614,549 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 22,484,099 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 22,754,761 Zv9 DIRECT Busch-Nentwich et al., 2013
la010910Tg 13 22,696,258 - 22,696,268 Zv9 ZFIN_Zv9 BurgessLin
la011473Tg 13 22,699,661 - 22,699,671 Zv9 ZFIN_Zv9 BurgessLin
la018458Tg 13 22,742,091 - 22,742,101 Zv9 ZFIN_Zv9 BurgessLin
la027404Tg 13 22,699,190 - 22,699,200 Zv9 ZFIN_Zv9 BurgessLin
hu4087 13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING linkagesDirectMem1
13 GRCz11 OTHER_MAPPING linkagesDirectMem2
la010910Tg 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la011473Tg 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la018458Tg 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la027404Tg 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
p3 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa8457 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa44785 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
13 316.4 cR BMPR-IA Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
13 50.2 cM bmpr1a Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
fgf8a GENE 13 1.3 cM Correa et al., 2005
neurog3 GENE 13 1.3 cM Correa et al., 2005
wnt8b GENE 13 2.5 cM Correa et al., 2005
pax2a GENE 13 2.6 cM Correa et al., 2005
chuk GENE 13 1.3 cM Correa et al., 2005
z17223 SSLP 13 Smith et al., 2011 Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13  ...
z6259 SSLP 13 Smith et al., 2011 Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13  ...
hu4087 Feature 13 0.0 KB Smith et al., 2011 Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13  ...

OTHER MAPPING INFORMATION
Genomic Feature hu4087 is an allele of bmpr1aa
Marker Type Chr Distance Publication / Person Comments
bmpr1aa GENE 13 0.0 KB Smith et al., 2011 Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13  ...
z6259 SSLP 13 2.1 cM Smith et al., 2011 Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13  ...
z17223 SSLP 13 26.5 cM Smith et al., 2011 Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13  ...
Genomic Feature hu4087 is an allele of bmpr1aa
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