Gene

cyp2r1

ID

ZDB-GENE-110114-1

Name

cytochrome P450, family 2, subfamily R, polypeptide 1

Symbol

cyp2r1 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to have heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Involved in cellular response to vitamin D; hematopoietic stem cell proliferation; and vitamin D3 metabolic process. Predicted to localize to cytoplasm and intracellular membrane-bounded organelle. Is expressed in liver; muscle; ovary; and visceral fat. Human ortholog(s) of this gene implicated in type 1 diabetes mellitus. Orthologous to human CYP2R1 (cytochrome P450 family 2 subfamily R member 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Peng et al., 2017

Cross-Species Comparison

High Throughput Data

Expression Atlas

Thisse Expression Data

Wild Type Expression Summary

Phenotype

All Phenotype Data: 12 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cyp2r1 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
vitamin D-dependent rickets type 1B	Alliance	Rickets due to defect in vitamin D 25-hydroxylation deficiency	600081

Associated With cyp2r1 Via Experimental Models

Human Disease	Fish	Conditions	Citations
vitamin D-dependent rickets type 1B	cyp2r1^zf734/zf734	standard conditions	Cortes et al., 2015

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017972	Cytochrome P450, conserved site
Family	IPR001128	Cytochrome P450
Family	IPR002401	Cytochrome P450, E-class, group I
Homologous_superfamily	IPR036396	Cytochrome P450 superfamily

Domain Details Per Protein

Protein	Length	Cytochrome P450	Cytochrome P450, conserved site	Cytochrome P450, E-class, group I	Cytochrome P450 superfamily
UniProtKB:F8W4J4 InterPro	190
UniProtKB:A9JRH5 InterPro	488
UniProtKB:F8W5N4 InterPro	229
UniProtKB:F6P2A1 InterPro	506

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Length (nt)	Analysis
mRNA	cyp2r1-201 (1) Ensembl	2317 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cyp2r1-202 (1) Ensembl	886 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cyp2r1-203 (1) Ensembl	813 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	cyp2r1-003 (1) Ensembl	314 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations