Gene

rps2

ID

ZDB-GENE-040426-2454

Name

ribosomal protein S2

Symbol

rps2 Nomenclature History

Previous Names

fc94f01
ik:tdsubc_2h2 (1)
tdsubc_2h2
wu:fb10e01 (1)
wu:fc94f01
wu:fj09b04 (1)
xx:tdsubc_2h2
zgc:85824

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to localize to cytosolic small ribosomal subunit. Is expressed in epidermis; mesenchyme; nervous system; pectoral fin; and pharyngeal arch 3-7 skeleton. Orthologous to human RPS2 (ribosomal protein S2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

14 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:85824 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rps2 Human Ortholog

No data available

Associated With rps2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site
Domain	IPR005324	Small ribosomal subunit protein uS5, C-terminal
Domain	IPR013810	Small ribosomal subunit protein uS5, N-terminal
Family	IPR000851	Small ribosomal subunit protein uS5
Family	IPR005711	Small ribosomal subunit protein uS5, eukaryotic/archaeal
Homologous_superfamily	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
Homologous_superfamily	IPR020568	Ribosomal protein uS5 domain 2-type superfamily

Domain Details Per Protein

Protein	Length	Ribosomal protein uS5 domain 2-type superfamily	Small ribosomal subunit protein uS5	Small ribosomal subunit protein uS5, C-terminal	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Small ribosomal subunit protein uS5, eukaryotic/archaeal	Small ribosomal subunit protein uS5, N-terminal	Small ribosomal subunit protein uS5, N-terminal, conserved site
UniProtKB:Q6NWC3 InterPro PDB	280

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rps2-201 (1) Ensembl	Ensembl	890 nt	Select Tool ZFIN BLAST
mRNA	rps2-203 (1) Ensembl	Ensembl	919 nt	Select Tool ZFIN BLAST
mRNA	rps2-204 (1) Ensembl	Ensembl	777 nt	Select Tool ZFIN BLAST
ncRNA	rps2-003 (1) Ensembl	Ensembl	349 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations