FIGURE

Fig. 6

ID
ZDB-FIG-250228-34
Publication
Shainer et al., 2025 - Transcriptomic neuron types vary topographically in function and morphology
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Fig. 6

Neurons of a specific t-type may assume distinct morphologies and projection patterns.

a, Sparsely labelled cort neurons were registered into the standard brain (n = 62). Right, anatomical matrix. AF, arborization field; IPN, interpeduncular nucleus; SAC, stratum album centrale; SGC, stratum griseum centrale; SM, stratum marginale; SO, stratum opticum. b, Sparsely labelled itpr1b neurons were registered into the standard brain (n = 10). Right, anatomical matrix. NIN, neuropil interneurons. c, Sparsely labelled atf5b neurons were registered into the standard brain (n = 77). Neurons are colour coded according to their m-type. Right, anatomical matrix. d, Sparsely labelled sp5l+ neurons were registered into the standard brain (n = 53). Right, anatomical matrix. A, anterior; P, posterior; V, ventral. e, atf5b interneurons (n = 49) and ipsilateral neurons (n = 18) were mirrored to the left hemisphere, and a KDE was measured according to their soma position, revealing separation of m-types along the anterior–posterior and dorsal–ventral axes. Transverse and coronal views of the SPV layer are shown. f, sp5l interneurons (n = 16) and ipsilateral neurons (n = 29) were mirrored to the left hemisphere, and a KDE was measured according to their soma position, revealing separation of m-types along the anterior–posterior and dorsal–ventral axes. g, Registered confocal stack of atf5b and sp5l transgenic fish. A single fish example of each transgenic line out of three specimens imaged. A single focal plane spanning the OT is shown. Scale bar, 50 μm. h, z-projection of the nucleus isthmi (NI) area, showing atf5b and sp5l projections forming collaterals at different parts of the nucleus isthmi.

Expression Data

Expression Detail
Antibody Labeling
Phenotype Data

Phenotype Detail
Acknowledgments
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