Research
General Information
ZIRC
ZFIN: Gene: efnb2a
ZFIN ID: ZDB-GENE-990415-67

Gene Name:ephrin B2a
Gene Symbol: efnb2a
Previous Names: efnb2, ephrin-B2a, id:ibd5072
Nomenclature History


GENE EXPRESSION:(current status)
All expression data: 73 figure(s) from 50 publications
Directly submitted expression data: 4 figure(s) (6 images) from Kudoh et al., 2001 [ibd5072]
  7 figure(s) (33 images) from Thisse et al., 2005 [eu689]
Wild Type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Larval:Day 5 (120.00h-144.00h, 3.9mm, 6 teeth)
  artery, blood vessel endothelial cell ... (all 35)
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Mutant line(s):   3 genotypes
Allele(s):   fh263, hu3393, unrec_efnb2a
Phenotype: (current status)
  Data: 1 figure from Pickart et al., 2006
  Observed in: blood circulation
Knockdown reagents: MO1-efnb2a (1) ,   MO2-efnb2a (2) ,   MO3-efnb2a (1)

GENE PRODUCTS:

Gene Ontology
Ontology GO Term
Biological Process axon target recognition (more)
Cellular Component integral to membrane (more)
All GO Terms (9)

Protein Families, Domains and Sites:
  • InterPro:IPR001799 (1)
  • InterPro:IPR008972 (1)
  • InterPro:IPR019765 (1)
  • PROSITE:PS01299 (1)
  • Pfam:PF00812 (1)
  • Loading Transcript Data...

    Gene Product Description


    SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    efnb2a Contained in [BAC] CH211-149B20 (1)    (order this)
    efnb2a Encodes [EST] eu689 (1) , ibd5072    (order this) , fc29f11 (1)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131023 (1) 999 bp
    Genomic GenBank:CR391949 (1) 162252 bp
    Polypeptide UniProtKB:B0CLY3 (1) 332 aa
    Sequence Clusters UniGene:75819 (1)
    All Sequence Information (16)

    OTHER  efnb2a  GENE / MARKER PAGES:

  • Entrez Gene:30219 (1)
  • VEGA:OTTDARG00000020664 (1)
  • Ensembl(Zv8):ENSDARG00000020164 (1)

  • MAPPING INFORMATION:
      LG:  9    Details   View Map: Merged  Individual Panels

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA
    Zebrafish efnb2a  9
    Human EFNB2  13 (q33)
  • OMIM:600527
  • Entrez Gene:1948
  • Mouse Efnb2  8 (2.00 cM)
  • MGI:105097
  • Entrez Gene:13642
  • Orthology Details

    CITATIONS   (80)