ZFIN ID: ZDB-GENE-990415-67
Gene Name: ephrin-B2a
Gene Symbol: efnb2a
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: efnb2, ephrin-B2a, id:ibd5072

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ephrin receptor binding activity; involved in several processes, including angioblast cell migration involved in selective angioblast sprouting, animal organ development, and  ...
GENE EXPRESSION
All Expression Data: 183 figures from 129 publications
Directly Submitted Expression Data: 4 figures (6 images) from Kudoh et al., 2001 [ibd5072]
  7 figures (33 images) from Thisse et al., 2005 [eu689]
Wild-type Stages, Structures: Blastula:1k-cell (3.0h-3.33h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
efnb2a_unrecovered Point Mutation Unknown Unknown ENU
fh263 Point Mutation Unknown Unknown ENU
hu3393 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa13177 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 5 figures from 5 publications
    Observed in:
    DISEASE ASSOCIATED WITH efnb2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH efnb2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon target recognition (more)
    Cellular Component plasma membrane (more)
    Molecular Function ephrin receptor binding (more)
    GO Terms (all 21)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001799 (1)
  • InterPro:IPR008972 (1)
  • InterPro:IPR019765 (1)
  • InterPro:IPR031328 (1)
  • InterPro:IPR034255 (1)
  • PROSITE:PS01299 (1)
  • PROSITE:PS51551 (1)
  • Pfam:PF00812 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA efnb2a-002 (1) 534
    efnb2a-003 (1) 840
    mRNA efnb2a-201 (1) 4598
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM efnb2a
    MARKER RELATIONSHIPS
    efnb2aContained in: [BAC] CH211-149B20 (1) (order this)
    efnb2aEncodes: [EST] eu689 (1), ibd5072 (order this), fc29f11 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131023 (1) 999bp
    Genomic GenBank:CR391949 (1) 162252bp
    Select Tool
    Polypeptide UniProtKB:B0CLY3 (1) 332aa
    Sequence Clusters UniGene:75819 (1)
    Sequence Information (all 22)
    OTHER efnb2a GENE PAGES
  • Alliance (1)
  • Gene:30219 (1)
  • VEGA:OTTDARG00000020664 (1)
  • Ensembl(GRCz11):ENSDARG00000020164 (2)
  • ORTHOLOGY for efnb2a (Chr: 9)
    CITATIONS (250)