Gene

hoxb5a

ID
ZDB-GENE-980526-70
Name
homeobox B5a
Symbol
hoxb5a Nomenclature History
Previous Names
  • hox-2.1
  • hox-B5
  • hoxb5
  • wu:fc38c09
  • z-18
  • ZF-21
  • ZF21
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in brain development and cell fate specification. Predicted to localize to nucleus. Is expressed in several structures, including central nervous system; mesenchyme; mesoderm; neural tube; and somite. Orthologous to human HOXB5 (homeobox B5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
32 figures from 22 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hoxb5a Human Ortholog
No data available
Associated With hoxb5a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR001827 Homeobox protein, antennapedia type, conserved site
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR020479 Homeodomain, metazoa
Family IPR017995 Homeobox protein, antennapedia type
Family IPR050296 Antennapedia-type homeobox
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Antennapedia-type homeobox Homedomain-like superfamily Homeobox, conserved site Homeobox protein, antennapedia type Homeobox protein, antennapedia type, conserved site Homeodomain Homeodomain, metazoa
UniProtKB:P09014 275
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hoxb5a-201 (1) Ensembl 1,790 nt
mRNA ottdart00000001811 (1) Havana 1,953 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations