Gene

efnb2a

ID
ZDB-GENE-990415-67
Name
ephrin-B2a
Symbol
efnb2a Nomenclature History
Previous Names
  • efnb2
  • ephrin-B2a
  • id:ibd5072
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have ephrin receptor binding activity. Involved in several processes, including angioblast cell migration involved in selective angioblast sprouting; nervous system development; and optic vesicle morphogenesis. Predicted to localize to plasma membrane. Is expressed in several structures, including brain; germ ring; hindbrain neural keel; immature eye; and vasculature. Orthologous to human EFNB2 (ephrin B2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
215 figures from 152 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from 6 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With efnb2a Human Ortholog
No data available
Associated With efnb2a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019765 Ephrin, conserved site
Domain IPR001799 Ephrin receptor-binding domain
Domain IPR034255 Ephrin-B ectodomain
Family IPR031328 Ephrin
Homologous_superfamily IPR008972 Cupredoxin
Domain Details Per Protein
Protein Length Cupredoxin Ephrin Ephrin-B ectodomain Ephrin, conserved site Ephrin receptor-binding domain
UniProtKB:B0CLY3 332
UniProtKB:O73874 332
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA efnb2a-201 (1) Ensembl 4,598 nt
ncRNA efnb2a-002 (1) Ensembl 534 nt
ncRNA efnb2a-003 (1) Ensembl 840 nt
Interactions and Pathways
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-efnb2 polyclonal IgG Goat
  • IHC
  • WB
R&D Systems
11
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations