Gene

paxbp1

ID
ZDB-GENE-070112-2352
Name
PAX3 and PAX7 binding protein 1
Symbol
paxbp1 Nomenclature History
Previous Names
  • zgc:158234
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human PAXBP1 (PAX3 and PAX7 binding protein 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With paxbp1 Human Ortholog
No data available
Associated With paxbp1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR022783 GCF, C-terminal
Family IPR012890 Intron Large complex component GCFC2-like
Domain Details Per Protein
Protein Length GCF, C-terminal Intron Large complex component GCFC2-like
UniProtKB:E9QDJ4 894
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript paxbp1-205 (1) Ensembl 810 nt
mRNA paxbp1-202 (1) Ensembl 2,368 nt
mRNA paxbp1-204 (1) Ensembl 3,319 nt
ncRNA zgc:158234-003 (1) Ensembl 1,026 nt
ncRNA zgc:158234-004 (1) Ensembl 789 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations