ZFIN ID: ZDB-TSCRIPT-090929-17725
Transcript Name: paxbp1-204
Previous Name: zgc:158234-001

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Transcript Type: mRNA
Annotation Status:
Strain: TU
Non Reference Strains:
Associated with Genes:
SEQUENCE
OTTDART00000037302 (1) [ Show ] (double-click sequence to select) [Download]
Select Analysis Tool
>tpe|OTTDART00000037302|OTTDARG00000027649|ZDB-GENE-070112-2352 zgc:158234|OTTDARP00000029889 CH211-69K21.1-001 LG_ AL929315.8 Danio rerio protein_coding NOVEL, 3319 bp
GTGGACTTGTTATTATCTCTGGCGCTCTGCAAAAACATAA
AAACCAGTCTGAATATACTCTTCTAGACGCTTCATCACCA
TGTTTAAAAAAGCTAAGAGATGCAATTTCAGGCGGCGGAA
TGACTCGGAGGATGAGGAAAAAGAGGAGCAGCAACAGTCC
GGTGGGCCCGGGGCTGAAGACTCCGCGAGCCCGAGTGAGT
CCGGCAGCGGCCCCGCTCCCGGAGCAAACGTGCTGAACAA
CCACGGAAACGGATTTCAGCCAGGTGCTGTCAAGGCCGTT
AAAGAGAAGAAAAAGAGGAAGGAGATCCGAGAGGAGCCGA
AAGCAAGTCTGCTGAGCTTCCAGGATGATGAAGATGAAGC
AGAAGTTTTCCGTGTGAAGAAGTCCAACCACAGCAAGAAG
ATCGTCAAGCAGCTCAAGAAAGAATACAAGGAGGATTTGG
AGAAGACTGTACCGGAGCAAAGCACTCGTATTGGTGGTCA
GAATCTGACCATTAAAGAGGAGCCCTTAGAGGGCAGCAGA
GCCAGCAGTGAACAAGGAGAAGAAGAAATGGAGGTGGACA
GCAATGAGGATCAGGAGGAGGAGGGTGATCAGAAGTCTGC
AGGTGGAGCGTTTAAAGAAAATCTGTCAGCCCTCAGCTTA
CTCAGACCAGGTGAGATTCCTGATGCAGCCTTCATCCATG
CTGCACGTAAACGTCGTCAGATGGCTCGAGAGCTCGGCGG
AGACACTCCACTGGTCGAGAATGATCCGACAAACAAACGT
CTCGTTCACGAAGATGAAAACGGAGACATGGATGATGATG
AAGATGAAAAGAGAATCGTCTTCAGTGGAGTCAACACGAA
GAGTCAGAGGCAGAAAATAGCAGAGGAGATTGGTATTGAA
GGCAGTGATGATGAAGCTCTAGATAATGGACAGGATGAGG
AAGTGAGCCGTTGGGAGCAGGAGCAGATCAGGAAGGGCAT
TAGCATCCCACAGGTCCAAACCCAGCCTGAAGATACAAGC
ATGTATTACCAGGGCAGTTATGATGCTCAGCCGTATGGTG
CATCCTACGCCATGCCGTTTAACTACGCCACTGCCGTAGC
AGGAGTTGACAATAGCAAACCGCTGAAAGCAGAGCCGTCA
GTTCCCTATCCCATTCCCTCTTGTGAACTGACCCCTATAA
CCACAGATCTGGTAAAGAAACGCCTCCAAGACAGGCTGAG
CTTCATGCGTCAGGGGCACAATACCAATGCCCGGCGCTAT
CAGCAGATCCAGGAGGATCTGGAGGCCTCCAAAAAGGCCA
TCCGGGTCCTGGAGGGCTCCTCTGTAGAGGCCGCAGACAA
ATATAGATTCTTGCAAGAAATGCGAGGGTATGTTGGAGAC
TTGCTTGAGTGTTTGAGTGAAAAGGTGCCTGTCATTCTGG
AGCTAGAGGCCGCCATGCACCAGTTACTTCGACAGCGGGC
GTCCCGTCTCGTCCAGAGAAGACAGGATGATATTAAAGAT
GAATCGTCGGAGTTTTCCAGCCTTTCAAGTAAGGCTGTTA
TGGCCCCTAACCTGGACTCATTTGGCCGAGATCGTACTGC
CTATCTGGAGCTCGCAAAGCAAAGGAGGATAGCTGAAAGA
GAAGCCAGACGAACTCGTCGCAGACAAGCTCGTGAGCAGA
ACGACAAGAGAGCAGAGCATAAGGAAGGACTGTCTAGTGA
CGATGAAGAGACGTCCACTGACATTACCAGCTTCGACTCA
GAGAGAGAGCGCATCTTAAAAGAGTCAAAGAAGGTGTTTG
AGGATGTGGTGGAGGATTTCCATTCTCTGGACAATATCAA
ATCTCACTTTGAGACCTGGAGAAAGCTGTATTACAGCTGC
TACAGAGACGCCTACATTGGATTGTGTCTGCCCAAACTCT
TCAACCCTCTTATTCGGCTGCAGCTTATCTCGTGGTCCCC
ACTGGAGGTGGAGTGCTCCAACTTTGAGTACATGCTGTGG
TTTGAGTCTCTGCTCTTCTATGGCTGTGGGGAGCAAAGTG
CTCTAAAGAAAGAGGAAGACGTGGATAACAACCTGCTTCC
TGCTATTGTAGAAAGAGTGCTGCTTCCTAAACTAGCAGTG
CTAACGGATCAGATCTGGGATCCACTGTCCAACAGCCAGA
CATACAGACTGGTGGCATTCATGAAGAGGCTAGTGAAAGA
CTATCCCACTGTCCTGCACGGCGAAAACCGCAACACACAA
GAGCTGCTAAGGACCGTGATCATGCGAATTCGACGGACTC
TTGATGATGACATTTTCCTGCCTCTGTTTCCAAAAAACGT
TATGGAGAACAAAAACTCTGGTGCTTACCTTTTCTCCCAG
AGGCAGTTTTGGTCTTGTGTGAAGTTTCTTGGGAATATCT
TAATGTGGGATGGGATCCTGTCTCTGTCTGTGCTGAAAGA
TCTGGCCATTGACAGCACACTGAACCGCTACATCCTCTCA
GCCCTGCAGACCACTGATGCCAGCGAGGAGCATGTGGAGA
AATGCCGCCGGGTGGTGGAGTGTTTCCCTGTTCAGTGGTT
CAGCAGTCTGAAAGGACAGCAGACGCTCCCTCCACTGGAG
AACTTCTGCAGATTCTTGAAGCACTTGTCCAGCAGCCTGT
ACCGCAGCTGTGTGGCAGGATCAGATGTGGAGAAGAGGAA
TGTCAGGGAACACATAAAGGAGGTGATTCGGCTTCTGGGA
CGCCTCAACGCTTTAGACCATGTGATCACAGTCGCGTCTG
AACATGGCATCAAGGATATAAAGACTCTTCTTGAGAAAAA
ATGAAAGGCAAAGCAATGGGACCATGTAAATACTGTGAAT
AATGTACATTTTAGTTGTGGCTGAAAGGGTTTTCCTTTGA
CACGTGGGTGGAATTTAGTGATCAGTAATTCCTGAAATCC
AGTGAAACTGCCACTGATTTGGGTTTGAAGTGTGTTAGGA
CAGTTTTACCCCCTTTCCTGAAGAGACATCTCTGCTTTTT
ACTTCACTTTTTTTTTAAGAACTGGGTCTTAATGGATCTT
TTTAAACTTTTCTCTTCAAGAAAAGACCACTTTACAATTC
GCACATTGGTTCTGGTTGCACTAAAGCTGGATTTCTTTGA
GAACAGGTTACATGCAGCATATTGTAAACAACGTTCAAAA
TATTATTTATGCACAGTCATGTGCCCAAAAAAAAAAAACA
GTGTTTGACCTGCTCGTGTGCCAATCTCATCTTTAATCAA
ATGAACATGACATACTGGCAAACAAAACCATGTGCTACCG
TAACGAATGTACTTATTTTTTCATTTGTCCTTTTCCTGGA
TCTTGAAATGTTTTATTTGCAAAAATAAAGGCTGAATGA

paxbp1 TRANSCRIPTS
Type Name Length (nt) Analysis
aberrant processed transcript paxbp1-205 (1)    Ensembl 810
mRNA paxbp1-202 (1)    Ensembl 2368
paxbp1-204 3319
ncRNA zgc:158234-003 (1)    Ensembl 1026
zgc:158234-004 (1)    Ensembl 789
SEGMENT (CLONE AND PROBE) RELATIONSHIPS
paxbp1-204 Contained in:
[BAC] CH211-69K21 (1)

Genome Resources: Vega_Trans:OTTDART00000037302 (1),  Ensembl_Trans:ENSDART00000139850 (1)
PROTEIN PRODUCTS No links to external site
ZEBRAFISH SUPPORTING SEQUENCES
Type Accession # Length (nt/aa) Analysis
RNA GenBank:CA495807 (1) 907 nt
GenBank:EH455352 (1) 839 nt
GenBank:DT058270 (1) 741 nt
GenBank:AL918865 (1) 535 nt
GenBank:AL922100 (1) 531 nt
GenBank:EB905691 (1) 383 nt
CITATIONS (2)