| ZFIN ID: ZDB-BAC-070404-630 |
| SEQUENCE INFORMATION |
| BAC Name: | CH211-175H18 |
|---|
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_199933 (1) | 3341 nt |
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| RefSeq:NM_199782 (1) | 2184 nt |
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| RefSeq:NM_001003858 (1) | 2086 nt |
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| RefSeq:NM_001003483 (1) | 1304 nt |
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| RefSeq:NM_001017640 (1) | 1160 nt |
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| RefSeq:NM_001287082 (1) | 1073 nt |
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| RefSeq:XM_009302496 (1) | 11220 nt |
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| RefSeq:XM_021471801 (1) | 11219 nt |
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| RefSeq:XM_021474609 (1) | 11171 nt |
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| RefSeq:XM_009302494 (1) | 10977 nt |
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| RefSeq:XM_001341269 (1) | 10956 nt |
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| RefSeq:XM_021474605 (1) | 9904 nt |
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| RefSeq:XM_021474606 (1) | 9883 nt |
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| RefSeq:XM_021471798 (1) | 9819 nt |
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| RefSeq:XM_021474607 (1) | 9804 nt |
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| RefSeq:XM_021471799 (1) | 9798 nt |
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| RefSeq:XM_021471800 (1) | 9748 nt |
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| RefSeq:XM_005166291 (1) | 9724 nt |
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| RefSeq:XM_021474608 (1) | 9682 nt |
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| RefSeq:XM_021471802 (1) | 9138 nt |
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| RefSeq:XM_021477182 (1) | 9134 nt |
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| RefSeq:XM_021477183 (1) | 4588 nt |
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| RefSeq:XM_001336035 (1) | 4425 nt |
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| RefSeq:XM_005166281 (1) | 3311 nt |
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| RefSeq:XM_021476877 (1) | 2799 nt |
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| RefSeq:XM_005166280 (1) | 2150 nt |
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| RefSeq:XM_001341164 (1) | 2079 nt |
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| RefSeq:XM_021476951 (1) | 2064 nt |
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| RefSeq:XM_021474106 (1) | 1789 nt |
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| RefSeq:XM_021477184 (1) | 1673 nt |
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| RefSeq:XM_021476952 (1) | 1575 nt |
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| RefSeq:XM_009302497 (1) | 1488 nt |
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| RefSeq:XM_005166287 (1) | 1279 nt |
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| RefSeq:XM_005166289 (1) | 1259 nt |
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| RefSeq:XM_005166285 (1) | 1210 nt |
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| RefSeq:XM_005166286 (1) | 1168 nt |
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| RefSeq:XM_021477185 (1) | 939 nt |
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| GenBank:GFIL01011812 (1) | 4722 nt |
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| GenBank:GFIL01029169 (1) | 4721 nt |
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| GenBank:BC047200 (1) | 3341 nt |
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| GenBank:BC155208 (1) | 3313 nt |
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| GenBank:GFIL01026684 (1) | 3033 nt |
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| GenBank:GFIL01014743 (1) | 2239 nt |
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| GenBank:GFIL01027664 (1) | 2226 nt |
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| GenBank:BC045857 (1) | 2139 nt |
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| GenBank:AY319287 (1) | 2086 nt |
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| GenBank:BC162256 (1) | 2065 nt |
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| GenBank:BC162259 (1) | 2065 nt |
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| GenBank:GDQQ01037907 (1) | 2017 nt |
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| GenBank:BC068344 (1) | 1984 nt |
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| GenBank:BN001083 (1) | 1968 nt |
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| GenBank:BC165472 (1) | 1942 nt |
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| GenBank:BN000861 (1) | 1926 nt |
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| GenBank:GDQQ01018964 (1) | 1789 nt |
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| GenBank:GFIL01000831 (1) | 1575 nt |
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| GenBank:GDQQ01026740 (1) | 1327 nt |
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| GenBank:BC075873 (1) | 1289 nt |
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| GenBank:BC152173 (1) | 1182 nt |
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| GenBank:BC092808 (1) | 1160 nt |
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| GenBank:BC155150 (1) | 1152 nt |
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| GenBank:EH457062 (1) | 1034 nt |
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| GenBank:EH440439 (1) | 981 nt |
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| GenBank:EH466345 (1) | 973 nt |
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| GenBank:CN016358 (1) | 951 nt |
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| GenBank:EH441964 (1) | 949 nt |
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| GenBank:EH482784 (1) | 938 nt |
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| GenBank:CN021670 (1) | 933 nt |
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| GenBank:EH560061 (1) | 913 nt |
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| GenBank:EH538851 (1) | 841 nt |
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| GenBank:CK687664 (1) | 707 nt |
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| GenBank:CO350968 (1) | 707 nt |
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| GenBank:BC162882 (1) | 629 nt |
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| GenBank:BC162889 (1) | 628 nt |
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| GenBank:AI965267 (1) | 535 nt |
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| GenBank:EH473871 (1) | 533 nt |
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| GenBank:AI793485 (1) | 494 nt |
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| GenBank:AW342629 (1) | 488 nt |
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| GenBank:AW344300 (1) | 366 nt |
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| GenBank:AI877525 (1) | 283 nt |
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| Genomic | RefSeq:NW_018395380 (1) | 529647 nt | Blast at MegaBLAST |
| RefSeq:NW_018394654 (1) | 354480 nt | Blast at MegaBLAST | |
| GenBank:BX004984 (1) | 264738 nt | Blast at MegaBLAST | |
| GenBank:AL953891 (1) | 242282 nt | Blast at MegaBLAST | |
| GenBank:AL807381 (1) | 230718 nt | Blast at MegaBLAST | |
| GenBank:CR533579 (1) | 199327 nt | ||
| GenBank:CR855206 (2) | 149781 nt | ||
| GenBank:CR854855 | 144317 nt | ||
| GenBank:CR848790 (2) | 25998 nt | ||
| Polypeptide | UniProtKB:E7F723 (1) | 1934 aa |
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| UniProtKB:A0A8M1PUY5 (1) | 1927 aa |
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| UniProtKB:A0A8M9QAB0 (1) | 1873 aa |
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| UniProtKB:A0A8M9Q5E7 (1) | 1866 aa |
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| UniProtKB:A0A8M9PGB4 (1) | 1865 aa |
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| UniProtKB:A0A8M9PKF2 (1) | 1865 aa |
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| UniProtKB:A0A8M9PRH1 (1) | 1858 aa |
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| UniProtKB:A0A8M2BDT3 (1) | 1824 aa |
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| UniProtKB:A0A8M9PTD2 (1) | 1824 aa |
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| UniProtKB:A0A8M9Q232 (1) | 1824 aa |
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| UniProtKB:A0A8M3ATG2 (1) | 1823 aa |
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| UniProtKB:A0A8M9PYQ6 (1) | 1823 aa |
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| UniProtKB:A0A8M9PZC4 (1) | 1823 aa |
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| UniProtKB:A0A8M9P9A2 (1) | 1635 aa |
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| UniProtKB:A0A8M9PMZ8 (1) | 1635 aa |
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| UniProtKB:F1QLF9 (1) | 912 aa |
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| UniProtKB:Q7ZYW6 (1) | 910 aa |
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| UniProtKB:A0A8M9PM45 (1) | 873 aa |
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| UniProtKB:A0A8M2BDQ1 (1) | 641 aa |
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| UniProtKB:F1QNE0 (1) | 622 aa |
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| UniProtKB:Q6EIY6 (1) | 614 aa |
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| UniProtKB:A0A8M1PZG6 (1) | 591 aa |
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| UniProtKB:E7EXT1 (1) | 591 aa |
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| UniProtKB:A0A8M9QAI4 (1) | 579 aa |
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| UniProtKB:A0A0R4IH70 (1) | 483 aa |
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| UniProtKB:A0A8M1PS38 (1) | 483 aa |
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| UniProtKB:A0A8M9PMB8 (1) | 422 aa |
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| UniProtKB:A0A8M3B3I4 (1) | 403 aa |
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| UniProtKB:A0A8M9Q703 (1) | 367 aa |
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| UniProtKB:A0A8M2BDN5 (1) | 351 aa |
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| UniProtKB:A0A8M2BDV8 (1) | 326 aa |
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| UniProtKB:Q568L5 (1) | 324 aa |
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| UniProtKB:Q6DHU4 (1) | 313 aa |
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| UniProtKB:F1QUY4 (1) | 249 aa |
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| UniProtKB:A0A8M9Q4J2 (1) | 224 aa |
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| UniProtKB:A0A8M9QG70 (1) | 161 aa |
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| RefSeq:NP_001017640 (1) | 324 aa |
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| RefSeq:NP_001003483 (1) |
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| RefSeq:NP_001003858 (1) |
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| RefSeq:NP_001274011 (1) |
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| RefSeq:NP_956076 (1) |
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| RefSeq:NP_956227 (1) |
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| RefSeq:XP_005166342 (1) | 351 aa |
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| RefSeq:XP_005166343 (1) | 326 aa |
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| RefSeq:XP_005166344 (1) | 326 aa |
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| RefSeq:XP_005166346 (1) | 326 aa |
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| RefSeq:XP_001336071 (1) |
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| RefSeq:XP_001341200 (1) |
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| RefSeq:XP_001341305 (1) |
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| RefSeq:XP_005166337 (1) |
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| RefSeq:XP_005166338 (1) |
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| RefSeq:XP_005166348 (1) |
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| RefSeq:XP_009300769 (1) |
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| RefSeq:XP_009300771 (1) |
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| RefSeq:XP_009300772 (1) |
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| RefSeq:XP_021327473 (1) |
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| RefSeq:XP_021327474 (1) |
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| RefSeq:XP_021327475 (1) |
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| RefSeq:XP_021327476 (1) |
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| RefSeq:XP_021327477 (1) |
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| RefSeq:XP_021329781 (1) |
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| RefSeq:XP_021330280 (1) |
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| RefSeq:XP_021330281 (1) |
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| RefSeq:XP_021330282 (1) |
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| RefSeq:XP_021330283 (1) |
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| RefSeq:XP_021330284 (1) |
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| RefSeq:XP_021332552 (1) |
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| RefSeq:XP_021332626 (1) |
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| RefSeq:XP_021332627 (1) |
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| RefSeq:XP_021332857 (1) |
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| RefSeq:XP_021332858 (1) |
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| RefSeq:XP_021332859 (1) |
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| RefSeq:XP_021332860 (1) |
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| GenPept:AAI55209 (1) | 912 aa |
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| GenPept:AAH47200 (1) | 910 aa |
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| GenPept:CAL90973 (1) | 655 aa |
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| GenPept:CAJ44439 (1) | 641 aa |
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| GenPept:AAH45857 (1) | 624 aa |
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| GenPept:AAI65472 (1) | 624 aa |
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| GenPept:AAI62256 (1) | 614 aa |
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| GenPept:AAI62259 (1) | 614 aa |
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| GenPept:AAQ82785 (1) | 614 aa |
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| GenPept:AAH68344 (1) | 411 aa |
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| GenPept:AAH92808 (1) | 324 aa |
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| GenPept:AAI55151 (1) | 324 aa |
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| GenPept:Q568L5 (1) | 324 aa |
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| GenPept:AAH75873 (1) | 313 aa |
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| GenPept:AAI52174 (1) | 313 aa |
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| GenPept:Q6DHU4 (1) | 313 aa |
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| GenPept:AAI62882 (1) | 158 aa |
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| GenPept:AAI62889 (1) | 158 aa |
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CH211-175H18 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] akr1a1b (14) | RNA | RefSeq:XM_005166287 | 1279 |
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| RNA | RefSeq:XM_005166289 | 1259 |
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| RNA | RefSeq:XM_005166285 | 1210 |
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| RNA | RefSeq:XM_005166286 | 1168 |
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| RNA | RefSeq:NM_001017640 | 1160 |
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| RNA | GenBank:GFIL01000831 | 1575 |
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| RNA | GenBank:BC092808 | 1160 |
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|
| RNA | GenBank:BC155150 | 1152 |
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|
| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:A0A8M2BDN5 | 351 |
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| Polypeptide | UniProtKB:A0A8M2BDV8 | 326 |
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| Polypeptide | UniProtKB:Q568L5 | 324 |
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| Polypeptide | RefSeq:XP_005166342 | 351 |
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| Polypeptide | RefSeq:XP_005166346 | 326 |
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| Polypeptide | RefSeq:XP_005166344 | 326 |
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| Polypeptide | RefSeq:XP_005166343 | 326 |
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| Polypeptide | RefSeq:NP_001017640 | 324 |
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| Polypeptide | GenPept:Q568L5 | 324 |
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| Polypeptide | GenPept:AAI55151 | 324 |
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| Polypeptide | GenPept:AAH92808 | 324 |
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| [GENE] ccdc17 (4) | RNA | RefSeq:XM_001341164 | 2079 |
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| RNA | RefSeq:XM_021477184 | 1673 |
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| RNA | RefSeq:XM_009302497 | 1488 |
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| RNA | RefSeq:XM_021477185 | 939 |
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| RNA | GenBank:GFIL01014743 | 2239 |
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| RNA | GenBank:CN016358 | 951 |
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|
| RNA | GenBank:CN021670 | 933 |
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| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:E7EXT1 | 591 |
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| Polypeptide | UniProtKB:A0A8M1PZG6 | 591 |
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| Polypeptide | UniProtKB:A0A8M3B3I4 | 403 |
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| Polypeptide | UniProtKB:A0A8M9Q703 | 367 |
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| Polypeptide | UniProtKB:A0A8M9QG70 | 161 |
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| Polypeptide | RefSeq:XP_021332860 |
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| Polypeptide | RefSeq:XP_021332859 |
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| Polypeptide | RefSeq:XP_009300772 |
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| Polypeptide | RefSeq:XP_001341200 |
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| [GENE] gpbp1l1 (7) | RNA | RefSeq:XM_021477183 | 4588 |
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| RNA | RefSeq:XM_001336035 | 4425 |
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| RNA | GenBank:GFIL01011812 | 4722 |
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| RNA | GenBank:AI965267 | 535 |
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| RNA | GenBank:AI793485 | 494 |
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| RNA | GenBank:AW342629 | 488 |
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| RNA | GenBank:AW344300 | 366 |
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| RNA | GenBank:AI877525 | 283 |
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|
| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:A0A8M1PS38 | 483 |
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| Polypeptide | UniProtKB:A0A0R4IH70 | 483 |
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| Polypeptide | RefSeq:XP_021332858 |
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| Polypeptide | RefSeq:XP_001336071 |
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| [GENE] mast2 (9) | RNA | RefSeq:XM_009302496 | 11220 |
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| RNA | RefSeq:XM_021471801 | 11219 |
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| RNA | RefSeq:XM_021474609 | 11171 |
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| RNA | RefSeq:XM_009302494 | 10977 |
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| RNA | RefSeq:XM_001341269 | 10956 |
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| RNA | RefSeq:XM_021474605 | 9904 |
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| RNA | RefSeq:XM_021474606 | 9883 |
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| RNA | RefSeq:XM_021471798 | 9819 |
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| RNA | RefSeq:XM_021474607 | 9804 |
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| RNA | RefSeq:XM_021471799 | 9798 |
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| RNA | RefSeq:XM_021471800 | 9748 |
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| RNA | RefSeq:XM_005166291 | 9724 |
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| RNA | RefSeq:XM_021474608 | 9682 |
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| RNA | RefSeq:XM_021471802 | 9138 |
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| RNA | RefSeq:XM_021477182 | 9134 |
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| RNA | RefSeq:XM_021474106 | 1789 |
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|
| RNA | GenBank:GDQQ01037907 | 2017 |
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| RNA | GenBank:CK687664 | 707 |
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|
| Genomic | RefSeq:NW_018395380 | 529647 | Blast at MegaBLAST | |
| Genomic | RefSeq:NW_018394654 | 354480 | Blast at MegaBLAST | |
| Genomic | GenBank:BX004984 | 264738 | Blast at MegaBLAST | |
| Genomic | GenBank:AL953891 | 242282 | Blast at MegaBLAST | |
| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR533579 | 199327 | ||
| Genomic | GenBank:CR855206 | 149781 | ||
| Genomic | GenBank:CR854855 | 144317 | ||
| Genomic | GenBank:CR848790 | 25998 | ||
| Polypeptide | UniProtKB:E7F723 | 1934 |
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| Polypeptide | UniProtKB:A0A8M1PUY5 | 1927 |
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| Polypeptide | UniProtKB:A0A8M9QAB0 | 1873 |
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| Polypeptide | UniProtKB:A0A8M9Q5E7 | 1866 |
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| Polypeptide | UniProtKB:A0A8M9PKF2 | 1865 |
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| Polypeptide | UniProtKB:A0A8M9PGB4 | 1865 |
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| Polypeptide | UniProtKB:A0A8M9PRH1 | 1858 |
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| Polypeptide | UniProtKB:A0A8M9Q232 | 1824 |
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| Polypeptide | UniProtKB:A0A8M9PTD2 | 1824 |
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| Polypeptide | UniProtKB:A0A8M2BDT3 | 1824 |
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| Polypeptide | UniProtKB:A0A8M9PZC4 | 1823 |
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| Polypeptide | UniProtKB:A0A8M9PYQ6 | 1823 |
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| Polypeptide | UniProtKB:A0A8M3ATG2 | 1823 |
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| Polypeptide | UniProtKB:A0A8M9PMZ8 | 1635 |
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| Polypeptide | UniProtKB:A0A8M9P9A2 | 1635 |
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| Polypeptide | UniProtKB:A0A8M9Q4J2 | 224 |
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| Polypeptide | RefSeq:XP_021332857 |
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| Polypeptide | RefSeq:XP_021330284 |
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| Polypeptide | RefSeq:XP_021330283 |
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| Polypeptide | RefSeq:XP_021330282 |
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| Polypeptide | RefSeq:XP_021330281 |
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| Polypeptide | RefSeq:XP_021330280 |
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| Polypeptide | RefSeq:XP_021329781 |
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| Polypeptide | RefSeq:XP_021327477 |
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| Polypeptide | RefSeq:XP_021327476 |
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| Polypeptide | RefSeq:XP_021327475 |
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| Polypeptide | RefSeq:XP_021327474 |
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| Polypeptide | RefSeq:XP_021327473 |
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| Polypeptide | RefSeq:XP_009300771 |
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| Polypeptide | RefSeq:XP_009300769 |
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| Polypeptide | RefSeq:XP_005166348 |
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| Polypeptide | RefSeq:XP_001341305 |
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| [GENE] mpl (27) | RNA | RefSeq:XM_005166280 | 2150 |
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| RNA | RefSeq:NM_001003858 | 2086 |
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| RNA | GenBank:GFIL01026684 | 3033 |
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| RNA | GenBank:AY319287 | 2086 |
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| RNA | GenBank:BC162259 | 2065 |
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| RNA | GenBank:BC162256 | 2065 |
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| RNA | GenBank:BN001083 | 1968 |
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| RNA | GenBank:BN000861 | 1926 |
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| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:A0A8M2BDQ1 | 641 |
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| Polypeptide | UniProtKB:Q6EIY6 | 614 |
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| Polypeptide | RefSeq:XP_005166337 |
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| Polypeptide | RefSeq:NP_001003858 |
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| Polypeptide | GenPept:CAL90973 | 655 |
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| Polypeptide | GenPept:CAJ44439 | 641 |
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| Polypeptide | GenPept:AAQ82785 | 614 |
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| Polypeptide | GenPept:AAI62259 | 614 |
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| Polypeptide | GenPept:AAI62256 | 614 |
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| [GENE] nasp (12) | RNA | RefSeq:NM_199782 | 2184 |
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| RNA | RefSeq:XM_021476951 | 2064 |
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| RNA | RefSeq:XM_021476952 | 1575 |
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| RNA | GenBank:GFIL01027664 | 2226 |
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| RNA | GenBank:BC045857 | 2139 |
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| RNA | GenBank:BC068344 | 1984 |
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| RNA | GenBank:BC165472 | 1942 |
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| RNA | GenBank:EH457062 | 1034 |
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| RNA | GenBank:EH441964 | 949 |
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| RNA | GenBank:EH482784 | 938 |
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| RNA | GenBank:EH473871 | 533 |
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| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:F1QNE0 | 622 |
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| Polypeptide | UniProtKB:A0A8M9QAI4 | 579 |
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| Polypeptide | UniProtKB:A0A8M9PMB8 | 422 |
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| Polypeptide | RefSeq:XP_021332627 |
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| Polypeptide | RefSeq:XP_021332626 |
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| Polypeptide | RefSeq:NP_956076 |
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| Polypeptide | GenPept:AAI65472 | 624 |
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| Polypeptide | GenPept:AAH45857 | 624 |
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| Polypeptide | GenPept:AAH68344 | 411 |
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| [GENE] orc1 (18) | RNA | RefSeq:NM_199933 | 3341 |
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| RNA | RefSeq:XM_005166281 | 3311 |
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| RNA | RefSeq:XM_021476877 | 2799 |
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| RNA | GenBank:GFIL01029169 | 4721 |
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| RNA | GenBank:BC047200 | 3341 |
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| RNA | GenBank:BC155208 | 3313 |
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| RNA | GenBank:CO350968 | 707 |
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| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:F1QLF9 | 912 |
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| Polypeptide | UniProtKB:Q7ZYW6 | 910 |
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| Polypeptide | UniProtKB:A0A8M9PM45 | 873 |
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| Polypeptide | RefSeq:XP_021332552 |
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| Polypeptide | RefSeq:XP_005166338 |
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| Polypeptide | RefSeq:NP_956227 |
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| Polypeptide | GenPept:AAI55209 | 912 |
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| Polypeptide | GenPept:AAH47200 | 910 |
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| [GENE] prpf38a (9) | RNA | RefSeq:NM_001003483 | 1304 |
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| RNA | GenBank:GDQQ01026740 | 1327 |
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| RNA | GenBank:BC075873 | 1289 |
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| RNA | GenBank:BC152173 | 1182 |
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| RNA | GenBank:EH560061 | 913 |
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| RNA | GenBank:EH538851 | 841 |
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| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:Q6DHU4 | 313 |
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| Polypeptide | RefSeq:NP_001003483 |
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| Polypeptide | GenPept:Q6DHU4 | 313 |
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| Polypeptide | GenPept:AAI52174 | 313 |
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| Polypeptide | GenPept:AAH75873 | 313 |
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| [GENE] tmem69 (7) | RNA | RefSeq:NM_001287082 | 1073 |
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| RNA | GenBank:GDQQ01018964 | 1789 |
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| RNA | GenBank:EH440439 | 981 |
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| RNA | GenBank:EH466345 | 973 |
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| RNA | GenBank:BC162882 | 629 |
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| RNA | GenBank:BC162889 | 628 |
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| Genomic | GenBank:AL807381 | 230718 | Blast at MegaBLAST | |
| Genomic | GenBank:CR854855 | 144317 | ||
| Polypeptide | UniProtKB:F1QUY4 | 249 |
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| Polypeptide | RefSeq:NP_001274011 |
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| Polypeptide | GenPept:AAI62889 | 158 |
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| Polypeptide | GenPept:AAI62882 | 158 |
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