| ZFIN ID: ZDB-BAC-060503-1861 |
| SEQUENCE INFORMATION |
| BAC Name: | CH211-3O3 |
|---|
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_201319 (1) | 2862 nt |
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| RefSeq:NM_001014316 (1) | 2200 nt |
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| RefSeq:NM_131019 (1) | 2178 nt |
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| RefSeq:NM_001077630 (1) | 1487 nt |
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| RefSeq:NM_001423439 (1) | 1423 nt |
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| RefSeq:NR_186837 (1) | 770 nt |
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| RefSeq:XM_681540 (1) | 18781 nt |
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| RefSeq:XM_073913004 (1) | 18696 nt |
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| RefSeq:XM_068223333 (1) | 4790 nt |
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| RefSeq:XM_073911748 (1) | 3224 nt |
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| RefSeq:XM_073911749 (1) | 3128 nt |
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| RefSeq:XM_073911747 (1) | 3071 nt |
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| RefSeq:XM_068223334 (1) | 2399 nt |
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| RefSeq:XM_073912309 (1) | 2343 nt |
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| RefSeq:XR_011016728 (1) | 2140 nt |
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| GenBank:GFIL01000033 (1) | 17472 nt |
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| GenBank:GFIL01030790 (1) | 5142 nt |
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| GenBank:GFIL01012510 (1) | 4815 nt |
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| GenBank:GFIL01038732 (1) | 4717 nt |
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| GenBank:BC055651 (1) | 2280 nt |
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| GenBank:GDQH01015322 (1) | 2255 nt |
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| GenBank:GFIL01026998 (1) | 2199 nt |
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| GenBank:BC091995 (1) | 2185 nt |
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| GenBank:AF540956 (1) | 2179 nt |
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| GenBank:BC117597 (1) | 2100 nt |
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| GenBank:AY258034 (1) | 1500 nt |
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| GenBank:BC163097 (1) | 1487 nt |
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| GenBank:BC163087 (1) | 1486 nt |
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| GenBank:DQ139956 (1) | 1335 nt |
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| GenBank:BC164778 (1) | 1216 nt |
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| GenBank:AF019626 (1) | 1125 nt |
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| GenBank:CF549833 (1) | 790 nt |
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| GenBank:DV595480 (1) | 775 nt |
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| GenBank:DR724501 (1) | 758 nt |
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| GenBank:EB933459 (1) | 667 nt |
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| GenBank:BU492988 (1) | 639 nt |
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| GenBank:EB763758 (1) | 603 nt |
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| GenBank:CD284381 (1) | 591 nt |
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| GenBank:EB763749 (1) | 577 nt |
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| GenBank:BC094979 (1) | 574 nt |
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| GenBank:BI984224 (1) | 573 nt |
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| GenBank:AW076835 (1) | 511 nt |
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| GenBank:AL926814 (1) | 458 nt |
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| GenBank:AJ318758 (1) | 179 nt |
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| Genomic | GenBank:CR753890 (1) | 201771 nt | Blast at MegaBLAST |
| GenBank:BX323586 | 171172 nt | ||
| GenBank:CR936487 (1) | 153728 nt | ||
| GenBank:CT737230 (1) | 122646 nt | ||
| GenBank:AL591593 (1) | 121251 nt | ||
| GenBank:AL672217 (1) | 117322 nt | ||
| GenBank:CR932999 (2) | 73930 nt | ||
| GenBank:CR457483 (2) | 47864 nt | ||
| GenBank:AL672154 (2) | 10094 nt |
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| GenBank:AY323521 (1) | 6570 nt |
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| GenBank:HC889212 (1) | 1125 nt |
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| GenBank:JBMGRA010000009 (1) |
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| Polypeptide | UniProtKB:A0A8N7T793 (1) | 5913 aa |
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| UniProtKB:A0AC58GH86 (1) | 5913 aa |
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| UniProtKB:A0AB32TWV9 (1) | 896 aa |
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| UniProtKB:A0AC58GDN2 (1) | 896 aa |
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| UniProtKB:A0AC58GDP0 (1) | 896 aa |
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| UniProtKB:Q8JFR9 (1) | 896 aa |
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| UniProtKB:A0AB32TXT7 (1) | 736 aa |
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| UniProtKB:A0AC58GDN3 (1) | 736 aa |
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| UniProtKB:B0S641 (1) | 444 aa |
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| UniProtKB:B2GQK9 (1) | 382 aa |
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| UniProtKB:Q58EB4 (1) | 382 aa |
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| UniProtKB:O42222 (1) | 374 aa |
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| UniProtKB:A0AC58GF95 (1) | 358 aa |
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| UniProtKB:A0AB13A8M8 (1) | 89 aa |
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| UniProtKB:P0C8S0 (1) | 89 aa |
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| RefSeq:NP_958476 (1) | 896 aa |
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| RefSeq:NP_001071098 (1) | 444 aa |
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| RefSeq:NP_001014338 (1) | 382 aa |
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| RefSeq:NP_571094 (1) | 374 aa |
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| RefSeq:NP_001410368 (1) | 89 aa |
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| RefSeq:XP_073769105 (1) | 5913 aa |
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| RefSeq:XP_686632 (1) | 5913 aa |
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| RefSeq:XP_068079434 (1) | 896 aa |
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| RefSeq:XP_073767848 (1) | 896 aa |
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| RefSeq:XP_073767849 (1) | 896 aa |
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| RefSeq:XP_068079435 (1) | 736 aa |
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| RefSeq:XP_073767850 (1) | 736 aa |
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| RefSeq:XP_073768410 (1) | 358 aa |
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| GenPept:CAD43440 (1) | 896 aa |
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| GenPept:AAI17598 (1) | 651 aa |
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| GenPept:AAI63087 (1) | 444 aa |
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| GenPept:AAI63097 (1) | 444 aa |
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| GenPept:ABA29477 (1) | 444 aa |
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| GenPept:AAH91995 (1) | 382 aa |
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| GenPept:AAI64778 (1) | 382 aa |
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| GenPept:Q58EB4 (1) | 382 aa |
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| GenPept:AAB86693 (1) | 374 aa |
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| GenPept:AAP13068 (1) | 374 aa |
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| GenPept:AAQ11222 (1) | 374 aa |
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| GenPept:CAD43439 (1) | 374 aa |
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| GenPept:CBM42954 (1) | 374 aa |
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| GenPept:O42222 (1) | 374 aa |
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| GenPept:AAP85526 (1) | 373 aa |
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| GenPept:AAH55651 (1) | 372 aa |
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| GenPept:CAD43468 (1) | 194 aa |
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| GenPept:AAH94979 (1) | 80 aa |
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| GenPept:CAD58769 (1) | 39 aa |
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| GenPept:CAC86466 (1) | 33 aa |
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CH211-3O3 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] abca12 (20) | RNA | RefSeq:XM_681540 | 18781 |
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| RNA | RefSeq:XM_073913004 | 18696 |
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| RNA | GenBank:GFIL01000033 | 17472 |
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| RNA | GenBank:CF549833 | 790 |
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| RNA | GenBank:DV595480 | 775 |
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| RNA | GenBank:DR724501 | 758 |
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| RNA | GenBank:EB933459 | 667 |
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| RNA | GenBank:BU492988 | 639 |
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| RNA | GenBank:EB763758 | 603 |
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| RNA | GenBank:CD284381 | 591 |
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| RNA | GenBank:EB763749 | 577 |
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| RNA | GenBank:AW076835 | 511 |
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| Genomic | GenBank:JBMGRA010000009 |
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| Genomic | GenBank:CR753890 | 201771 | Blast at MegaBLAST | |
| Genomic | GenBank:BX323586 | 171172 | ||
| Genomic | GenBank:CR932999 | 73930 | ||
| Genomic | GenBank:CR457483 | 47864 | ||
| Polypeptide | UniProtKB:A0AC58GH86 | 5913 |
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| Polypeptide | UniProtKB:A0A8N7T793 | 5913 |
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| Polypeptide | RefSeq:XP_686632 | 5913 |
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| Polypeptide | RefSeq:XP_073769105 | 5913 |
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| [GENE] akap19 (6) | RNA | RefSeq:NM_001423439 | 1423 |
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| RNA | GenBank:GFIL01038732 | 4717 |
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| Genomic | GenBank:JBMGRA010000009 |
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| Genomic | GenBank:BX323586 | 171172 | ||
| Polypeptide | UniProtKB:P0C8S0 | 89 |
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| Polypeptide | UniProtKB:A0AB13A8M8 | 89 |
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| Polypeptide | RefSeq:NP_001410368 | 89 |
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| [GENE] hibch (15) | RNA | RefSeq:XM_073912309 | 2343 |
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| RNA | RefSeq:NM_001014316 | 2200 |
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| RNA | GenBank:GFIL01012510 | 4815 |
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| RNA | GenBank:BC091995 | 2185 |
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| RNA | GenBank:BC164778 | 1216 |
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| Genomic | GenBank:JBMGRA010000009 |
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| Genomic | GenBank:BX323586 | 171172 | ||
| Genomic | GenBank:CR936487 | 153728 | ||
| Polypeptide | UniProtKB:Q58EB4 | 382 |
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| Polypeptide | UniProtKB:B2GQK9 | 382 |
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| Polypeptide | UniProtKB:A0AC58GF95 | 358 |
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| Polypeptide | RefSeq:NP_001014338 | 382 |
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| Polypeptide | RefSeq:XP_073768410 | 358 |
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| Polypeptide | GenPept:Q58EB4 | 382 |
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| Polypeptide | GenPept:AAI64778 | 382 |
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| Polypeptide | GenPept:AAH91995 | 382 |
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| [GENE] mstnb (79) | RNA | RefSeq:NM_131019 | 2178 |
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| RNA | GenBank:GFIL01026998 | 2199 |
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| RNA | GenBank:AF540956 | 2179 |
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| RNA | GenBank:AY258034 | 1500 |
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| RNA | GenBank:AF019626 | 1125 |
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| RNA | GenBank:BC094979 | 574 |
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| RNA | GenBank:AJ318758 | 179 |
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| Genomic | GenBank:JBMGRA010000009 |
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| Genomic | GenBank:BX323586 | 171172 | ||
| Genomic | GenBank:CR936487 | 153728 | ||
| Genomic | GenBank:AL672217 | 117322 | ||
| Genomic | GenBank:AY323521 | 6570 |
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| Genomic | GenBank:HC889212 | 1125 |
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| Polypeptide | UniProtKB:O42222 | 374 |
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| Polypeptide | RefSeq:NP_571094 | 374 |
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| Polypeptide | GenPept:O42222 | 374 |
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| Polypeptide | GenPept:CBM42954 | 374 |
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| Polypeptide | GenPept:CAD43439 | 374 |
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| Polypeptide | GenPept:AAQ11222 | 374 |
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| Polypeptide | GenPept:AAP13068 | 374 |
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| Polypeptide | GenPept:AAB86693 | 374 |
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| Polypeptide | GenPept:AAP85526 | 373 |
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| Polypeptide | GenPept:AAH94979 | 80 |
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| Polypeptide | GenPept:CAC86466 | 33 |
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| [GENE] pms1 (11) | RNA | RefSeq:XM_068223333 | 4790 |
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| RNA | RefSeq:XM_073911748 | 3224 |
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| RNA | RefSeq:XM_073911749 | 3128 |
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| RNA | RefSeq:XM_073911747 | 3071 |
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| RNA | RefSeq:NM_201319 | 2862 |
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| RNA | RefSeq:XM_068223334 | 2399 |
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| RNA | GenBank:GFIL01030790 | 5142 |
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| RNA | GenBank:BC055651 | 2280 |
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| RNA | GenBank:BC117597 | 2100 |
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| RNA | GenBank:AL926814 | 458 |
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| Genomic | GenBank:JBMGRA010000009 |
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| Genomic | GenBank:BX323586 | 171172 | ||
| Genomic | GenBank:CT737230 | 122646 | ||
| Genomic | GenBank:AL591593 | 121251 | ||
| Genomic | GenBank:AL672217 | 117322 | ||
| Genomic | GenBank:AL672154 | 10094 |
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| Polypeptide | UniProtKB:Q8JFR9 | 896 |
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| Polypeptide | UniProtKB:A0AC58GDP0 | 896 |
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| Polypeptide | UniProtKB:A0AC58GDN2 | 896 |
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| Polypeptide | UniProtKB:A0AB32TWV9 | 896 |
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| Polypeptide | UniProtKB:A0AC58GDN3 | 736 |
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| Polypeptide | UniProtKB:A0AB32TXT7 | 736 |
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| Polypeptide | RefSeq:XP_073767849 | 896 |
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| Polypeptide | RefSeq:XP_073767848 | 896 |
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| Polypeptide | RefSeq:XP_068079434 | 896 |
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| Polypeptide | RefSeq:NP_958476 | 896 |
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| Polypeptide | RefSeq:XP_073767850 | 736 |
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| Polypeptide | RefSeq:XP_068079435 | 736 |
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| Polypeptide | GenPept:CAD43440 | 896 |
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| Polypeptide | GenPept:AAI17598 | 651 |
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| Polypeptide | GenPept:AAH55651 | 372 |
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| Polypeptide | GenPept:CAD43468 | 194 |
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| Polypeptide | GenPept:CAD58769 | 39 |
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| [GENE] pofut2 (11) | RNA | RefSeq:XR_011016728 | 2140 |
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| RNA | RefSeq:NM_001077630 | 1487 |
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| RNA | GenBank:GDQH01015322 | 2255 |
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| RNA | GenBank:BC163097 | 1487 |
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| RNA | GenBank:BC163087 | 1486 |
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| RNA | GenBank:DQ139956 | 1335 |
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| Genomic | GenBank:JBMGRA010000009 |
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| Genomic | GenBank:BX323586 | 171172 | ||
| Polypeptide | UniProtKB:B0S641 | 444 |
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| Polypeptide | RefSeq:NP_001071098 | 444 |
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| Polypeptide | GenPept:ABA29477 | 444 |
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| Polypeptide | GenPept:AAI63097 | 444 |
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| Polypeptide | GenPept:AAI63087 | 444 |
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| [GENE] si:ch211-3o3.7 (3) | RNA | RefSeq:NR_186837 | 770 |
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| RNA | GenBank:BI984224 | 573 |
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| Genomic | GenBank:JBMGRA010000009 |
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| Genomic | GenBank:BX323586 | 171172 |