ZFIN Sequences for Gene: CH211-155M12

ZFIN ID: ZDB-BAC-050218-592

ZFIN ID: ZDB-BAC-050218-592

SEQUENCE INFORMATION

BAC Name:	CH211-155M12

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001089415 (1)	3961 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001099450 (1)	1856 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001089416 (1)	1745 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NR_104068 (1)	698 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_068221333 (1)	7718 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073950814 (1)	6923 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005171743 (1)	4230 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005171744 (1)	4209 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005171745 (1)	4200 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_001923654 (1)	3629 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073951946 (1)	2913 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_068221270 (1)	2210 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_012406037 (1)	5118 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_012406683 (1)	2837 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01002007 (1)	5066 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC162262 (1)	3961 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC162268 (1)	3961 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01005149 (1)	3759 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01013117 (1)	3113 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01007172 (1)	1590 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH436172 (1)	894 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DT072212 (1)	799 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI667026 (1)	595 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL916114 (1)	491 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01035635 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:AL845369 (1)	190981 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX248080 (1)	188075 nt	Select Tool MegaBLAST Ensembl
	GenBank:AL928901	145957 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR854981 (1)	127614 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT009603 (1)	69540 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000005 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M2BJ18 (1)	1284 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BJ10 (1)	1277 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A0R4IYN3 (1)	1274 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A3KGU1 (1)	1267 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AB32TPW6 (1)	1228 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JKA4 (1)	958 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PQU4 (1)	637 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PRM9 (1)	637 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JNI2 (1)	637 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A2ARH2 (1)	637 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A3KGT9 (1)	443 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AB32TND9 (1)	373 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A0R4IB87 (1)	262 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001082884 (1)	1267 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001092920 (1)	443 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001082885 (1)	262 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005171800 (1)	1284 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005171801 (1)	1277 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005171802 (1)	1274 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_068077434 (1)	1134 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073806915 (1)	958 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_001923689 (1)	637 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073808047 (1)	637 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_068077371 (1)	373 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI62262 (1)	1267 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI62268 (1)	1267 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAM46900 (1)	443 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:A3KGT9 (1)		Select Tool ZFIN BLAST NCBI BLAST

CH211-155M12 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] adamts12 (10)	RNA	RefSeq:XM_068221333	7718	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AL916114	491	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000005		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:AL928901	145957	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR854981	127614	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0AB32TPW6	1228	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_068077434	1134	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] agpat9l (9)	RNA	RefSeq:XM_068221270	2210	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001099450	1856	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01002007	5066	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000005		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:BX248080	188075	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:AL928901	145957	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A3KGT9	443	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0AB32TND9	373	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001092920	443	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_068077371	373	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:CAM46900	443	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:A3KGT9		Select Tool ZFIN BLAST NCBI BLAST
[GENE] idua (9)	RNA	RefSeq:XM_001923654	3629	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_073951946	2913	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XR_012406683	2837	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01013117	3113	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:EH436172	894	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:DT072212	799	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI667026	595	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000005		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:AL845369	190981	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:BX248080	188075	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:AL928901	145957	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CT009603	69540	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A2ARH2	637	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0AC58JNI2	637	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M9PRM9	637	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M9PQU4	637	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_073808047	637	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_001923689	637	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] si:ch211-155m12.1 (1)	RNA	RefSeq:NM_001089416	1745	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01007172	1590	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000005		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:BX248080	188075	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:AL928901	145957	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0A0R4IB87	262	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001082885	262	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] tnksb (8)	RNA	RefSeq:XM_073950814	6923	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XR_012406037	5118	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005171743	4230	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005171744	4209	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005171745	4200	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001089415	3961	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01035635		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:BC162268	3961	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC162262	3961	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01005149	3759	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000005		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:BX248080	188075	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:AL928901	145957	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0A8M2BJ18	1284	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M2BJ10	1277	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A0R4IYN3	1274	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A3KGU1	1267	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0AC58JKA4	958	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005171800	1284	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005171801	1277	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005171802	1274	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001082884	1267	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_073806915	958	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI62268	1267	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI62262	1267	Select Tool ZFIN BLAST NCBI BLAST
[LINCRNAG] si:ch211-155m12.5 (1)	RNA	RefSeq:NR_104068	698	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000005		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:BX248080	188075	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:AL928901	145957	Select Tool MegaBLAST Ensembl