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ZFIN ID:
ZDB-GENE-041212-53
CITATIONS
(71 total)
Gene Name:
PTEN induced kinase 1
Gene Symbol:
pink1
Anichtchik, O., Diekmann, H., Fleming, A., Roach, A., Goldsmith, P., and Rubinsztein, D.C. (2008) Loss of PINK1 function affects development and results in neurodegeneration in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28(33):8199-8207
Arribat, Y., Grepper, D., Lagarrigue, S., Richard, J., Gachet, M., Gut, P., Amati, F. (2019) Mitochondria in Embryogenesis: An Organellogenesis Perspective. Frontiers in cell and developmental biology. 7:282
Babu, N.S., Murthy, C.L., Kakara, S., Sharma, R., Swamy, C.V., Idris, M.M. (2016) MPTP induced Parkinson's disease in zebrafish. Proteomics. 16(9):1407-20
Brown, S.J., Boussaad, I., Jarazo, J., Fitzgerald, J.C., Antony, P., Keatinge, M., Blechman, J., Schwamborn, J.C., Krüger, R., Placzek, M., Bandmann, O. (2021) PINK1 deficiency impairs adult neurogenesis of dopaminergic neurons. Scientific Reports. 11:6617
Burgoyne, T., Toms, M., Way, C., Tracey-White, D., Futter, C.E., Moosajee, M. (2022) Changes in Mitochondrial Size and Morphology in the RPE and Photoreceptors of the Developing and Ageing Zebrafish. Cells. 11(22):
Cao, Z., Su, M., Wang, H., Zhou, L., Meng, Z., Xiong, G., Liao, X., Lu, H. (2020) Carboxyl graphene oxide nanoparticles induce neurodevelopmental defects and locomotor disorders in zebrafish larvae. Chemosphere. 270:128611
Dong, Y., Yu, M., Wu, Y., Xia, T., Wang, L., Song, K., Zhang, C., Lu, K., Rahimnejad, S. (2022) Hydroxytyrosol Promotes the Mitochondrial Function through Activating Mitophagy. Antioxidants (Basel, Switzerland). 11(5)
Díaz-Casado, M.E., Lima, E., García, J.A., Doerrier, C., Aranda, P., Sayed, R.K., Guerra-Librero, A., G Escames, G., López, L.C., Acuña-Castroviejo, D. (2016) Melatonin rescues zebrafish embryos from the parkinsonian phenotype restoring the Parkin/PINK1/DJ-1/MUL1 network. Journal of pineal research. 61(1):96-107
Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
Feng, C.W., Wen, Z.H., Huang, S.Y., Hung, H.C., Chen, C.H., Yang, S.N., Chen, N.F., Wang, H.M., Hsiao, C.D., Chen, W.F. (2014) Effects of 6-Hydroxydopamine Exposure on Motor Activity and Biochemical Expression in Zebrafish (Danio Rerio) Larvae. Zebrafish. 11(3):227-39
Flinn, L.J., Keatinge, M., Bretaud, S., Mortiboys, H., Matsui, H., De Felice, E., Woodroof, H.I., Brown, L., McTighe, A., Soellner, R., Allen, C.E., Heath, P.R., Milo, M., Muqit, M.M., Reichert, A.S., Köster, R.W., Ingham, P.W., and Bandmann, O. (2013) TigarB causes mitochondrial dysfunction and neuronal loss in PINK1 deficiency. Annals of neurology. 74(6):837-47
Gao, D., Wu, M., Wang, C., Wang, Y., Zuo, Z. (2015) Chronic exposure to low benzo[a]pyrene level causes neurodegenerative disease-like syndromes in zebrafish (Danio rerio). Aquatic toxicology (Amsterdam, Netherlands). 167:200-208
Hu, Q., Guo, F., Zhao, F., Fu, Z. (2017) Effects of titanium dioxide nanoparticles exposure on parkinsonism in zebrafish larvae and PC12. Chemosphere. 173:373-379
Hu, Z., Zhang, J., and Zhang, Q. (2011) Expression pattern and functions of autophagy-related gene atg5 in zebrafish organogenesis. Autophagy. 7(12):1514-1527
Hu, Z.Y., Chen, B., Zhang, J.P., Ma, Y.Y. (2017) Up-regulation of autophagy-related gene 5 (
ATG5
) protects dopaminergic neurons in a zebrafish model of Parkinson's disease.. The Journal of biological chemistry. 292(44):18062-18074
Hughes, G.L., Lones, M.A., Bedder, M., Currie, P.D., Smith, S.L., Pownall, M.E. (2020) Machine learning discriminates a movement disorder in a zebrafish model of Parkinson's disease. Disease models & mechanisms. 13(10):
Ji, X., Wang, B., Paudel, Y.N., Li, Z., Zhang, S., Mou, L., Liu, K., Jin, M. (2021) Protective Effect of Chlorogenic Acid and Its Analogues on Lead-Induced Developmental Neurotoxicity Through Modulating Oxidative Stress and Autophagy. Frontiers in molecular biosciences. 8:655549
Jin, M., Li, N., Sheng, W., Ji, X., Liang, X., Kong, B., Yin, P., Li, Y., Zhang, X., Liu, K. (2020) Toxicity of different zinc oxide nanomaterials and dose-dependent onset and development of Parkinson's disease-like symptoms induced by zinc oxide nanorods. Environment International. 146:106179
Kansler, E.R., Verma, A., Langdon, E.M., Simon-Vermot, T., Yin, A., Lee, W., Attiyeh, M., Elemento, O., White, R.M. (2017) Melanoma genome evolution across species. BMC Genomics. 18:136
Kesh, S., Kannan, R.R., Balakrishnan, A. (2020) Naringenin alleviates 6-hydroxydopamine induced Parkinsonism in SHSY5Y cells and zebrafish model. Comparative biochemistry and physiology. Toxicology & pharmacology : CBP. 239:108893
Li, X., Dang, J., Li, Y., Wang, L., Li, N., Liu, K., Jin, M. (2020) Developmental neurotoxicity fingerprint of silica nanoparticles at environmentally relevant level on larval zebrafish using a neurobehavioral-phenomics-based biological warning method. The Science of the total environment. 752:141878
Li, X., Ji, X., Wang, R., Zhao, J., Dang, J., Gao, Y., Jin, M. (2019) Zebrafish behavioral phenomics employed for characterizing behavioral neurotoxicity caused by silica nanoparticles. Chemosphere. 240:124937
Li, Z., Cao, P., Meng, H., Li, D., Zhang, Y., Li, Y., Wang, S. (2021) Long-term exposure to 2-amino-3-methylimidazo[4,5-f]quinoline can trigger a potential risk of Parkinson's disease. Journal of hazardous materials. 412:125230
Matsui, H., Sugie, A. (2017) An optimized method for counting dopaminergic neurons in zebrafish. PLoS One. 12:e0184363
Merhi, R., Kalyn, M., Zhu-Pawlowsky, A., Ekker, M. (2021) Loss of
parla
Function Results in Inactivity, Olfactory Impairment, and Dopamine Neuron Loss in Zebrafish. Biomedicines. 9(2):
Moriya, S., Tan, V.P., Yee, A.K., Parhar, I.S. (2019) pink1, atp13a2 and uchl1 Expressions Are Affected by Inflammation in the Brain. Neuroscience letters. 708:134330
Noble, S., Ismail, A., Godoy, R., Xi, Y., and Ekker, M. (2012) Zebrafish Parla- and Parlb-deficiency affects dopaminergic neuron patterning and embryonic survival. Journal of neurochemistry. 122(1):196-207
O'Donnell, K.C., Vargas, M.E., and Sagasti, A. (2013) WldS and PGC-1alpha Regulate Mitochondrial Transport and Oxidation State after Axonal Injury. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(37):14778-14790
Petko, J.A., Kabbani, N., Frey, C., Woll, M., Hickey, K., Craig, M., Canfield, V.A., and Levenson, R. (2009) Proteomic and functional analysis of NCS-1 binding proteins reveals novel signaling pathways required for inner ear development in zebrafish. BMC Neuroscience. 10:27
Priyadarshini, M., Orosco, L.A., and Panula, P.J. (2013) Oxidative stress and regulation of Pink1 in zebrafish (Danio rerio). PLoS One. 8(11):e81851
Priyadarshini, M., Tuimala, J., Chen, Y.C., and Panula, P. (2013) A zebrafish model of PINK1 deficiency reveals key pathway dysfunction including HIF signaling. Neurobiology of disease. 54:127-38
Ren, Q., Jiang, X., Paudel, Y.N., Gao, X., Gao, D., Zhang, P., Sheng, W., Shang, X., Liu, K., Zhang, X., Jin, M. (2022) Co-treatment with natural HMGB1 inhibitor Glycyrrhizin exerts neuroprotection and reverses Parkinson's disease like pathology in Zebrafish. Journal of ethnopharmacology. 292:115234
Ren, Q., Jiang, X., Zhang, S., Gao, X., Paudel, Y.N., Zhang, P., Wang, R., Liu, K., Jin, M. (2022) Neuroprotective effect of YIAEDAER peptide against Parkinson's disease like pathology in zebrafish. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie. 147:112629
Sallinen, V., Kolehmainen, J., Priyadarshini, M., Toleikyt, G., Chen, Y.C., and Panula, P. (2010) Dopaminergic cell damage and vulnerability to MPTP in Pink1 knockdown zebrafish. Neurobiology of disease. 40(1):93-101
Soman, S., Keatinge, M., Moein, M., DaCosta, M., Mortiboys, H., Skupin, A., Sugunan, S., Bazala, M., Kuznicki, J., Bandmann, O. (2017) Inhibition of the mitochondrial calcium uniporter rescues dopaminergic neurons in pink1
-/-
zebrafish.. The European journal of neuroscience. 45(4):528-535
Soman, S.K., Bazała, M., Keatinge, M., Bandmann, O., Kuznicki, J. (2019) Restriction of mitochondrial calcium overload by
mcu
inactivation renders neuroprotective effect in Zebrafish models of Parkinson's disease. Biology Open. 8(10):
Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903
Wang, N., Luo, Z., Jin, M., Sheng, W., Wang, H.T., Long, X., Wu, Y., Hu, P., Xu, H., Zhang, X. (2019) Exploration of age-related mitochondrial dysfunction and the anti-aging effects of resveratrol in zebrafish retina. Aging. 11(10):3117-3137
Wang, Y., Liu, W., Yang, J., Wang, F., Yizhen, S., Zhong, Z.M., Wang, H., Hu, L.F., Liu, C.F. (2017) Parkinson's disease-like motor and non-motor symptoms in rotenone-treated zebrafish. Neurotoxicology. 58:103-109
Watson, L., Keatinge, M., Gegg, M., Bai, Q., Sandulescu, C., Vardi, A., Futerman, A.H., Schapira, A.H.V., Burton, E.A., Bandmann, O. (2019) Ablation of the pro-inflammatory master regulator miR-155 does not mitigate neuroinflammation or neurodegeneration in a vertebrate model of Gaucher's disease. Neurobiology of disease. 127:563-569
Wrighton, P.J., Shwartz, A., Heo, J.M., Quenzer, E.D., LaBella, K.A., Harper, J.W., Goessling, W. (2021) Quantitative intravital imaging reveals
in vivo
dynamics of physiological-stress induced mitophagy. Journal of Cell Science. 134(4):
Xi, Y., Ryan, J., Noble, S., Yu, M., Yilbas, A.E., and Ekker, M. (2010) Impaired dopaminergic neuron development and locomotor function in zebrafish with loss of pink1 function. The European journal of neuroscience. 31(4):623-633
Yang, R.M., Tao, J., Zhan, M., Yuan, H., Wang, H.H., Chen, S.J., Zhu, C., de Thé, H., Zhou, J., Guo, Y., Zhu, J. (2019) TAMM41 is required for heart valve differentiation via regulation of PINK-PARK2 dependent mitophagy. Cell death and differentiation. 26(11):2430-2446
Yurtsever, İ., Üstündağ, Ü.V., Ünal, İ., Ateş, P.S., Emekli-Alturfan, E. (2020) Rifampicin decreases neuroinflammation to maintain mitochondrial function and calcium homeostasis in rotenone-treated zebrafish. Drug and chemical toxicology. 45(4):1544-1551
Zhang, R., Tu, Y.X., Ye, D., Gu, Z., Chen, Z.X., Sun, Y. (2022) A Germline-Specific Regulator of Mitochondrial Fusion is Required for Maintenance and Differentiation of Germline Stem and Progenitor Cells. Advanced science (Weinheim, Baden-Wurttemberg, Germany). 9(36):e2203631
Zhang, S., Yu, Z., Xia, J., Zhang, X., Liu, K., Sik, A., Jin, M. (2020) Anti-Parkinson's disease activity of phenolic acids from Eucommia ulmoides Oliver leaf extracts and their autophagy activation mechanism. Food & function. 11(2):1425-1440
Zhang, Y., Nguyen, D.T., Olzomer, E.M., Poon, G.P., Cole, N.J., Puvanendran, A., Phillips, B.R., Hesselson, D. (2017) Rescue of Pink1 Deficiency by Stress-Dependent Activation of Autophagy. Cell chemical biology. 24(4):471-480.e4
Ünal, İ., Cansız, D., Sürmen, M.G., Sürmen, S., Sezer, Z., Beler, M., Üstündağ, Ü.V., Güzel, E., Alturfan, A.A., Emekli-Alturfan, E. (2022) Identification of Molecular Network of Gut-Brain Axis Associated with Neuroprotective Effects of PPARδ-Ligand Erucic Acid in Rotenone-Induced Parkinson's Disease Model in Zebrafish. The European journal of neuroscience. 57(4):585-606
Ünal, İ., Çalışkan-Ak, E., Üstündağ, Ü.V., Ateş, P.S., Alturfan, A.A., Altinoz, M.A., Elmaci, I., Emekli-Alturfan, E. (2019) Neuroprotective Effects of Mitoquinone and Oleandrin on Parkinson's Disease Model in Zebrafish. The International journal of neuroscience. 130(6):574-582
Burgoyne, T., Toms, M., Way, C., Tracey-White, D., Futter, C.E., Moosajee, M. (2022) Changes in Mitochondrial Size and Morphology in the RPE and Photoreceptors of the Developing and Ageing Zebrafish. Cells. 11(22):
Dong, Y., Yu, M., Wu, Y., Xia, T., Wang, L., Song, K., Zhang, C., Lu, K., Rahimnejad, S. (2022) Hydroxytyrosol Promotes the Mitochondrial Function through Activating Mitophagy. Antioxidants (Basel, Switzerland). 11(5)
Ren, Q., Jiang, X., Paudel, Y.N., Gao, X., Gao, D., Zhang, P., Sheng, W., Shang, X., Liu, K., Zhang, X., Jin, M. (2022) Co-treatment with natural HMGB1 inhibitor Glycyrrhizin exerts neuroprotection and reverses Parkinson's disease like pathology in Zebrafish. Journal of ethnopharmacology. 292:115234
Ren, Q., Jiang, X., Zhang, S., Gao, X., Paudel, Y.N., Zhang, P., Wang, R., Liu, K., Jin, M. (2022) Neuroprotective effect of YIAEDAER peptide against Parkinson's disease like pathology in zebrafish. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie. 147:112629
Zhang, R., Tu, Y.X., Ye, D., Gu, Z., Chen, Z.X., Sun, Y. (2022) A Germline-Specific Regulator of Mitochondrial Fusion is Required for Maintenance and Differentiation of Germline Stem and Progenitor Cells. Advanced science (Weinheim, Baden-Wurttemberg, Germany). 9(36):e2203631
Ünal, İ., Cansız, D., Sürmen, M.G., Sürmen, S., Sezer, Z., Beler, M., Üstündağ, Ü.V., Güzel, E., Alturfan, A.A., Emekli-Alturfan, E. (2022) Identification of Molecular Network of Gut-Brain Axis Associated with Neuroprotective Effects of PPARδ-Ligand Erucic Acid in Rotenone-Induced Parkinson's Disease Model in Zebrafish. The European journal of neuroscience. 57(4):585-606
Brown, S.J., Boussaad, I., Jarazo, J., Fitzgerald, J.C., Antony, P., Keatinge, M., Blechman, J., Schwamborn, J.C., Krüger, R., Placzek, M., Bandmann, O. (2021) PINK1 deficiency impairs adult neurogenesis of dopaminergic neurons. Scientific Reports. 11:6617
Ji, X., Wang, B., Paudel, Y.N., Li, Z., Zhang, S., Mou, L., Liu, K., Jin, M. (2021) Protective Effect of Chlorogenic Acid and Its Analogues on Lead-Induced Developmental Neurotoxicity Through Modulating Oxidative Stress and Autophagy. Frontiers in molecular biosciences. 8:655549
Li, Z., Cao, P., Meng, H., Li, D., Zhang, Y., Li, Y., Wang, S. (2021) Long-term exposure to 2-amino-3-methylimidazo[4,5-f]quinoline can trigger a potential risk of Parkinson's disease. Journal of hazardous materials. 412:125230
Merhi, R., Kalyn, M., Zhu-Pawlowsky, A., Ekker, M. (2021) Loss of
parla
Function Results in Inactivity, Olfactory Impairment, and Dopamine Neuron Loss in Zebrafish. Biomedicines. 9(2):
Wrighton, P.J., Shwartz, A., Heo, J.M., Quenzer, E.D., LaBella, K.A., Harper, J.W., Goessling, W. (2021) Quantitative intravital imaging reveals
in vivo
dynamics of physiological-stress induced mitophagy. Journal of Cell Science. 134(4):
Cao, Z., Su, M., Wang, H., Zhou, L., Meng, Z., Xiong, G., Liao, X., Lu, H. (2020) Carboxyl graphene oxide nanoparticles induce neurodevelopmental defects and locomotor disorders in zebrafish larvae. Chemosphere. 270:128611
Hughes, G.L., Lones, M.A., Bedder, M., Currie, P.D., Smith, S.L., Pownall, M.E. (2020) Machine learning discriminates a movement disorder in a zebrafish model of Parkinson's disease. Disease models & mechanisms. 13(10):
Jin, M., Li, N., Sheng, W., Ji, X., Liang, X., Kong, B., Yin, P., Li, Y., Zhang, X., Liu, K. (2020) Toxicity of different zinc oxide nanomaterials and dose-dependent onset and development of Parkinson's disease-like symptoms induced by zinc oxide nanorods. Environment International. 146:106179
Kesh, S., Kannan, R.R., Balakrishnan, A. (2020) Naringenin alleviates 6-hydroxydopamine induced Parkinsonism in SHSY5Y cells and zebrafish model. Comparative biochemistry and physiology. Toxicology & pharmacology : CBP. 239:108893
Li, X., Dang, J., Li, Y., Wang, L., Li, N., Liu, K., Jin, M. (2020) Developmental neurotoxicity fingerprint of silica nanoparticles at environmentally relevant level on larval zebrafish using a neurobehavioral-phenomics-based biological warning method. The Science of the total environment. 752:141878
Yurtsever, İ., Üstündağ, Ü.V., Ünal, İ., Ateş, P.S., Emekli-Alturfan, E. (2020) Rifampicin decreases neuroinflammation to maintain mitochondrial function and calcium homeostasis in rotenone-treated zebrafish. Drug and chemical toxicology. 45(4):1544-1551
Zhang, S., Yu, Z., Xia, J., Zhang, X., Liu, K., Sik, A., Jin, M. (2020) Anti-Parkinson's disease activity of phenolic acids from Eucommia ulmoides Oliver leaf extracts and their autophagy activation mechanism. Food & function. 11(2):1425-1440
Arribat, Y., Grepper, D., Lagarrigue, S., Richard, J., Gachet, M., Gut, P., Amati, F. (2019) Mitochondria in Embryogenesis: An Organellogenesis Perspective. Frontiers in cell and developmental biology. 7:282
Li, X., Ji, X., Wang, R., Zhao, J., Dang, J., Gao, Y., Jin, M. (2019) Zebrafish behavioral phenomics employed for characterizing behavioral neurotoxicity caused by silica nanoparticles. Chemosphere. 240:124937
Moriya, S., Tan, V.P., Yee, A.K., Parhar, I.S. (2019) pink1, atp13a2 and uchl1 Expressions Are Affected by Inflammation in the Brain. Neuroscience letters. 708:134330
Soman, S.K., Bazała, M., Keatinge, M., Bandmann, O., Kuznicki, J. (2019) Restriction of mitochondrial calcium overload by
mcu
inactivation renders neuroprotective effect in Zebrafish models of Parkinson's disease. Biology Open. 8(10):
Wang, N., Luo, Z., Jin, M., Sheng, W., Wang, H.T., Long, X., Wu, Y., Hu, P., Xu, H., Zhang, X. (2019) Exploration of age-related mitochondrial dysfunction and the anti-aging effects of resveratrol in zebrafish retina. Aging. 11(10):3117-3137
Watson, L., Keatinge, M., Gegg, M., Bai, Q., Sandulescu, C., Vardi, A., Futerman, A.H., Schapira, A.H.V., Burton, E.A., Bandmann, O. (2019) Ablation of the pro-inflammatory master regulator miR-155 does not mitigate neuroinflammation or neurodegeneration in a vertebrate model of Gaucher's disease. Neurobiology of disease. 127:563-569
Yang, R.M., Tao, J., Zhan, M., Yuan, H., Wang, H.H., Chen, S.J., Zhu, C., de Thé, H., Zhou, J., Guo, Y., Zhu, J. (2019) TAMM41 is required for heart valve differentiation via regulation of PINK-PARK2 dependent mitophagy. Cell death and differentiation. 26(11):2430-2446
Ünal, İ., Çalışkan-Ak, E., Üstündağ, Ü.V., Ateş, P.S., Alturfan, A.A., Altinoz, M.A., Elmaci, I., Emekli-Alturfan, E. (2019) Neuroprotective Effects of Mitoquinone and Oleandrin on Parkinson's Disease Model in Zebrafish. The International journal of neuroscience. 130(6):574-582
Hu, Q., Guo, F., Zhao, F., Fu, Z. (2017) Effects of titanium dioxide nanoparticles exposure on parkinsonism in zebrafish larvae and PC12. Chemosphere. 173:373-379
Hu, Z.Y., Chen, B., Zhang, J.P., Ma, Y.Y. (2017) Up-regulation of autophagy-related gene 5 (
ATG5
) protects dopaminergic neurons in a zebrafish model of Parkinson's disease.. The Journal of biological chemistry. 292(44):18062-18074
Kansler, E.R., Verma, A., Langdon, E.M., Simon-Vermot, T., Yin, A., Lee, W., Attiyeh, M., Elemento, O., White, R.M. (2017) Melanoma genome evolution across species. BMC Genomics. 18:136
Matsui, H., Sugie, A. (2017) An optimized method for counting dopaminergic neurons in zebrafish. PLoS One. 12:e0184363
Soman, S., Keatinge, M., Moein, M., DaCosta, M., Mortiboys, H., Skupin, A., Sugunan, S., Bazala, M., Kuznicki, J., Bandmann, O. (2017) Inhibition of the mitochondrial calcium uniporter rescues dopaminergic neurons in pink1
-/-
zebrafish.. The European journal of neuroscience. 45(4):528-535
Wang, Y., Liu, W., Yang, J., Wang, F., Yizhen, S., Zhong, Z.M., Wang, H., Hu, L.F., Liu, C.F. (2017) Parkinson's disease-like motor and non-motor symptoms in rotenone-treated zebrafish. Neurotoxicology. 58:103-109
Zhang, Y., Nguyen, D.T., Olzomer, E.M., Poon, G.P., Cole, N.J., Puvanendran, A., Phillips, B.R., Hesselson, D. (2017) Rescue of Pink1 Deficiency by Stress-Dependent Activation of Autophagy. Cell chemical biology. 24(4):471-480.e4
Babu, N.S., Murthy, C.L., Kakara, S., Sharma, R., Swamy, C.V., Idris, M.M. (2016) MPTP induced Parkinson's disease in zebrafish. Proteomics. 16(9):1407-20
Díaz-Casado, M.E., Lima, E., García, J.A., Doerrier, C., Aranda, P., Sayed, R.K., Guerra-Librero, A., G Escames, G., López, L.C., Acuña-Castroviejo, D. (2016) Melatonin rescues zebrafish embryos from the parkinsonian phenotype restoring the Parkin/PINK1/DJ-1/MUL1 network. Journal of pineal research. 61(1):96-107
Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
Gao, D., Wu, M., Wang, C., Wang, Y., Zuo, Z. (2015) Chronic exposure to low benzo[a]pyrene level causes neurodegenerative disease-like syndromes in zebrafish (Danio rerio). Aquatic toxicology (Amsterdam, Netherlands). 167:200-208
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Additional Citations (22):
Ensembl curators, GOA curators (2006) Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara. Manually curated data.
Gaudet, P., Livstone, M., Thomas, P., The Reference Genome Project (2010) Annotation inferences using phylogenetic trees. Automated Data Submission.
Thisse, B., Thisse, C. (2004) Fast Release Clones: A High Throughput Expression Analysis. ZFIN Direct Data Submission.
UniProt-GOA (2011) Gene Ontology annotation based on the automatic assignment of UniProtKB Subcellular Location terms in UniProtKB/TrEMBL entries. Manually curated data.
Zebrafish Nomenclature Committee (2003) Nomenclature Data Curation (2003-2010). Nomenclature Committee Submission.
Zebrafish Nomenclature Committee (2018) Nomenclature Data Curation (2018). Nomenclature Committee Submission.
ZFIN Staff (2022) Electronic Gene Ontology annotations created by ARBA machine learning models. Automated Data Submission.
ZFIN Staff (2006) Curation of Ensembl Database Links. Automated Data Submission.
ZFIN Staff (2002) Scientific Curation. Manually curated data.
ZFIN Staff (2003) Curation of orthology data. Manually curated data.
ZFIN Staff (2002) Curation of NCBI Gene Data Via Shared RNA Sequence IDs. Automated Data Submission.
ZFIN Staff (2002) Gene Ontology Annotation Through Association of UniProt Keywords with GO Terms. Automated Data Submission.
ZFIN Staff (2003) Gene Ontology Annotation Through Association of Enzyme Commission numbers with GO Terms. Automated Data Submission.
ZFIN Staff (2015) Data Model Change: Sequence Targeting Reagents Removed from Environment. ZFIN Historical Data.
ZFIN Staff (2017) Curation of PANTHER Gene IDs. Automated Data Submission.
ZFIN Staff (2013) Semi-automated association of ENSDARG identifiers with ZFIN genes for the ZMP project. Semi-automated Curation.
ZFIN Staff (2002) Gene Ontology Annotation Through Association of InterPro Records with GO Terms. Automated Data Submission.
ZFIN Staff (2017) Curation of Alliance of Genome Resources Database Links. Automated Data Submission.
ZFIN Staff (2023) Automated Curation of UniProt Database Links. Automated Data Submission.
ZFIN Staff (2019) Curation of genomic coordinates and sequences of directly submitted alleles.. Manually curated data.
ZFIN Staff (2020) Addition of links from ZFIN to Expression Atlas. Semi-automated Curation.
ZFIN Staff (2004) ZGC Data Curation and Association in ZFIN by ZFIN Staff. Semi-automated Curation.
ZFIN Staff (2023) Automated Curation of UniProt Database Links. Automated Data Submission.
ZFIN Staff (2022) Electronic Gene Ontology annotations created by ARBA machine learning models. Automated Data Submission.
ZFIN Staff (2020) Addition of links from ZFIN to Expression Atlas. Semi-automated Curation.
ZFIN Staff (2019) Curation of genomic coordinates and sequences of directly submitted alleles.. Manually curated data.
Zebrafish Nomenclature Committee (2018) Nomenclature Data Curation (2018). Nomenclature Committee Submission.
ZFIN Staff (2017) Curation of PANTHER Gene IDs. Automated Data Submission.
ZFIN Staff (2017) Curation of Alliance of Genome Resources Database Links. Automated Data Submission.
ZFIN Staff (2015) Data Model Change: Sequence Targeting Reagents Removed from Environment. ZFIN Historical Data.
ZFIN Staff (2013) Semi-automated association of ENSDARG identifiers with ZFIN genes for the ZMP project. Semi-automated Curation.
UniProt-GOA (2011) Gene Ontology annotation based on the automatic assignment of UniProtKB Subcellular Location terms in UniProtKB/TrEMBL entries. Manually curated data.
Gaudet, P., Livstone, M., Thomas, P., The Reference Genome Project (2010) Annotation inferences using phylogenetic trees. Automated Data Submission.
Ensembl curators, GOA curators (2006) Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara. Manually curated data.
ZFIN Staff (2006) Curation of Ensembl Database Links. Automated Data Submission.
Thisse, B., Thisse, C. (2004) Fast Release Clones: A High Throughput Expression Analysis. ZFIN Direct Data Submission.
ZFIN Staff (2004) ZGC Data Curation and Association in ZFIN by ZFIN Staff. Semi-automated Curation.
Zebrafish Nomenclature Committee (2003) Nomenclature Data Curation (2003-2010). Nomenclature Committee Submission.
ZFIN Staff (2003) Curation of orthology data. Manually curated data.
ZFIN Staff (2003) Gene Ontology Annotation Through Association of Enzyme Commission numbers with GO Terms. Automated Data Submission.
ZFIN Staff (2002) Gene Ontology Annotation Through Association of UniProt Keywords with GO Terms. Automated Data Submission.
ZFIN Staff (2002) Curation of NCBI Gene Data Via Shared RNA Sequence IDs. Automated Data Submission.
ZFIN Staff (2002) Scientific Curation. Manually curated data.
ZFIN Staff (2002) Gene Ontology Annotation Through Association of InterPro Records with GO Terms. Automated Data Submission.
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