Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
6	53.6 cM	z7248	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
6	423.77 cR	Z7248	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
6	5482.0 cR	z7248	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
sec61a1a	GENE	6		Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the  ... Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the sec61al1 gene on Chr 6 between markers z7248 and z22745.
z22745	SSLP	6		Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the  ... Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the sec61al1 gene on Chr 6 between markers z7248 and z22745.
c163	Feature	6		Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the  ... Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the sec61al1 gene on Chr 6 between markers z7248 and z22745.
z11919	SSLP	6		Shepard et al., 2007	Shepard, et al. (2007. Genes Dev. 21(1):55-59) reports mapping cds to LG6,  ... Shepard, et al. (2007. Genes Dev. 21(1):55-59) reports mapping cds to LG6, between Z11919 and Z7248 on a RH mapping panel.
espl1	GENE	6	0.3 cM	Shepard et al., 2007	Shepard, et al. (2007. Genes Dev. 21(1):55-59) reports mapping cds to LG6,  ... Shepard, et al. (2007. Genes Dev. 21(1):55-59) reports mapping cds to LG6, between Z11919 and Z7248 on a RH mapping panel.

OTHER MAPPING INFORMATION

Chr 6 Doll et al., 2011 Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the sec61al1 gene on Chr 6  ... Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the sec61al1 gene on Chr 6 between markers z7248 and z22745.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
IND	245,235		60.0
Forward Primer	GGTGACATGCCACTGATGTC
Reverse Primer	TAACGTGTGGTGGTCACACC
AB	0,243,231		60.0
Forward Primer	GGTGACATGCCACTGATGTC
Reverse Primer	TAACGTGTGGTGGTCACACC
EKW	0,235		60.0
Forward Primer	GGTGACATGCCACTGATGTC
Reverse Primer	TAACGTGTGGTGGTCACACC
TU	261,0,231		60.0
Forward Primer	GGTGACATGCCACTGATGTC
Reverse Primer	TAACGTGTGGTGGTCACACC