ZFIN ID: ZDB-GENE-980526-68

ZFIN ID: ZDB-GENE-980526-68

Mapping Details

Gene Name:	signal transducer and activator of transcription 3 (acute-phase response factor)
Symbol:	stat3

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN Gbrowse	3	17,030,665 - 17,107,445	GRCz11
Ensembl	3	17,030,665 - 17,107,445	GRCz11
Vega	3	16,880,865 - 16,957,645	GRCv10
NCBI Map Viewer	3	17,030,665 - 17,109,944	GRCz11
UCSC	3	-	GRCv10

Mapped Clones containing stat3
CH211-209D14	Chr: 3 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
ia23	3	17,082,577 - 17,082,589	GRCz11	Peron et al., 2020
ihb211	3	17,070,052 - 17,070,079	GRCz11	ZFIN Staff
ihb212	3	17,070,053 - 17,070,060	GRCz11	ZFIN Staff
sa938	3	17,081,226	GRCz11	Busch-Nentwich et al., 2013
	3	16,931,426	GRCz10	Busch-Nentwich et al., 2013
	3	16,701,207	Zv9	Busch-Nentwich et al., 2013
sa10162	3	17,090,552	GRCz11	Busch-Nentwich et al., 2013
	3	16,940,752	GRCz10	Busch-Nentwich et al., 2013
	3	16,710,533	Zv9	Busch-Nentwich et al., 2013
sa12185	3	17,094,819	GRCz11	Busch-Nentwich et al., 2013
	3	16,945,019	GRCz10	Busch-Nentwich et al., 2013
	3	16,714,800	Zv9	Busch-Nentwich et al., 2013
sa15744	3	17,070,131	GRCz11	Busch-Nentwich et al., 2013
	3	16,920,331	GRCz10	Busch-Nentwich et al., 2013
	3	16,690,112	Zv9	Busch-Nentwich et al., 2013
sa16856	3	17,094,819	GRCz11	Busch-Nentwich et al., 2013
	3	16,945,019	GRCz10	Busch-Nentwich et al., 2013
	3	16,714,800	Zv9	Busch-Nentwich et al., 2013
stl27	3	17,072,854 - 17,072,860	GRCz11	Liu et al., 2017
stl28	3	17,072,852 - 17,072,853	GRCz11	Liu et al., 2017

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
3	36.9 cM	stat3	Mother of Pearl (MOP)	Postlethwait, John H.	Data
3	34.1 cM	stat3	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
unp1137	STS	3	14.0 cR	Lewis et al., 2004	Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
z6566	SSLP	3	3.0 cR	Lewis et al., 2004	Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
unp1142	STS	3	13.0 cR	Lewis et al., 2004	Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
fc75a07	EST	3	10.0 cR	Lewis et al., 2004	Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
fj43f12	EST	3	9.0 cR	Lewis et al., 2004	Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.

Markers Encoded by stat3
fl59g06 Chr: 3 Details
fc15d02 Chr: 3 Details

Genomic Feature ia23 is an allele of stat3