Transcript

ube2m-202

ID

ZDB-TSCRIPT-141209-1651

Name

ube2m-202

Previous Names

ch1073-205c8.4-003
si:ch1073-205c8.4-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

si:ch1073-205c8.4 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000053973 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053973|OTTDARG00000037721|ZDB-GENE-141219-17 si:ch1073-205c8.4|OTTDARP00000042409 CH1073-205C8.4-003 LG_ CU929079.6 Danio rerio protein_coding NOVEL, 944 bp
CACACTCTCTCTCCCTCAGAGCGCAGCTCCCGAACACACC
GCGCTGTTTGCTCTGCAGAGGCCGAAGATGATCAAGCTTT
TCTCGCTGAAGCAGCAGAAGAAGGACGAGGAGTCAGCCGG
CGGGCCGCGCGCGGGGGGCGGCGGGAAGAAGGCGAGCGCG
GCCCAGCTGCGGATACAGAAGGACATCAATGAGCTGAACC
TCCCGAAGACCTGCGAGATCGTCTTTCCAGACCAGGACGA
CCTGCTGAACTTTAAGCTCATCATCTCTCCAGACGAGGGT
TTCTATAAAGGAGGGAAGTTCGTCTTCAGTTTTAAGGGCA
GGGTTATCCGCACGACCCCCCCAAAGTCAAGTGTGAAACG
ATGGTTTATCACCCCAACATTGACCTGGAGGGAAACGTCT
GTCTAAATATACTGAGAGAAGACTGGAAACCGGTGCTGAC
CATTAACTCCATCATATACGGACTACAGTACCTGTTCCTC
GAGCCCAATCCTGAAGACCCGCTGAATAAAGAGGCAGCAG
AGGTTCTGCAGACGAACCGGCGACTCTTCGAGCAGAACGT
CCAGCGGTCGCTGCGGGGCGGATACGTGGGCGCCACCTAC
TTCGAGCGCTGCCTGAAATAGTCCCGCGCCCGCCGGCCCT
CACGTCCGAGAATGCATTTATCGTTTACATGCGCTGAGAT
GTACTGACCGACACACTGACCGCTCTCGGGTGTGCGGGAC
GGTGGCGAGCGTTCACAGGCTGGTCAGTGGTTGTTGCTCA
GAGAATTCAGTCGTATTTCGCCACTATGCTGGTACCCACT
GTTTATTTTTTGCTGAGATTCACATGCTAACTCATCCTCC
ACTCAACATGAGCGTGCGCGGGGCAGACACACACACACAC
ACACACACACACACACACACACTCACACACACTTCTCTAT
TCCATCACCCAGCTTGAGGACTGA

Related Transcripts

Transcripts related to si:ch1073-205c8.4

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ube2m-202	Havana	944 nt
mRNA	ube2m-203 (1) Ensembl	Havana	863 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ube2m-204 (1) Ensembl	Havana	917 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ube2m-207 (1) Ensembl	Havana	1324 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ube2m-206 (1) Ensembl	Havana	1109 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ube2m-208 (1) Ensembl	Havana	770 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch1073-205c8.4-006 (1) Ensembl	Havana	548 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch1073-205c8.4-007 (1) Ensembl	Havana	786 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations