Transcript

sqstm1-002

ID

ZDB-TSCRIPT-090929-18112

Name

sqstm1-002

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Withdrawn by Sanger

Annotation Method

Havana

Associated With Genes

sqstm1 (1)

Strain

Non Reference Strain

Genome Resources

Vega_Trans:OTTDART00000037712 (1)

RNA Central

None

Note

None

Sequence

OTTDART00000037712 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000037712|OTTDARG00000027873|ZDB-GENE-040426-2204 sqstm1|no_translation sqstm1-002 LG_ CU075768.4 Danio rerio protein_coding KNOWN, 1832 bp
CGCAGAGTCCCGTGCTCGAGAAACGCATTTTCTACTGCGC
AACACTTCCAGAGGTTCAGGGAGAGAAGCTATTTTCCGCT
ACGATGTCGATGACAGTGAAAGCTTACCTTATCGGTAAGG
AGGACTGCAACAAGGAGATCCGTCGCTTCGCCGTGGATCA
AGATGTCTCAACAAGTTTCGAGTATTTGCAGCGAAAAGTG
CTCGATGTTTTTGTCGGTCTCAGGACTGCGCCCTTCCAAA
TGTACTATAAAGATGAAGATGGTGATATGATTGCCTTTTC
CTCTGACGATGAGCTAATGATGGGTTTGGCTCTTGTGAAG
GATGACACTTTCCGTCTCTTCATCAAGCAACGAAAAGAGC
ACAAACGTGATTCTTCTCCTCATGGAATTCCTGGGTTTCC
GTTCACTACACCTCACTTTAGCCCTCCTGGTCCCTGTCAT
ATGGGTCCATCTCCAATGGGGCCTCCAGGACCACCTCATA
TGGGGGGTCCTCCTCACCACCCTCACCCAATGTGCACCGT
TTGCCCCGATTATGACTTGTGCCCCACCTGCCAGAGCAAA
GGCCTGCACAAGGAGCATGCCCTCCTGCCCATCTTTCATC
CTATGGCCAACGTGTTTGAGTGGCTCCCTCGTGGGAAATT
TTGGCGTAAGATGAGACACTGCATGTGGGCAAATGCTCAA
GCTCAGGCTCAAAACCAGCCTCAGCCAGGTCCATCTGGAG
CGCAGCAAAACCAGGATGCTCCTGAAAACCCAAATGAGAA
TGGTGCTACTGCCTCTTCTCAGGCTAACGTGGAGTACCTA
AAGAACATCGGAGAAGAAGTGGCAGCCATGTTAAGCCCCC
TTGGCATAGATGTGGACATCGATGTTGAGCATGAGGGAAA
GCGGACCAAAGTAACCCCAACTCCTCCTGCCTCCAGTGGA
CCATCCAGTGCTCGGAGTGACAGTGGTTCTGTGGGGCTTC
TTTCTAGAGGCTCTGGTCCAGGAAGTCAGGCCACTGAAGA
GAGCGTCAGTGAGGGAACAAAGAAAGACCAATGTAGTGAT
GAGGAATGGACTCATCTTAGTGCTAAAGAGGTGGATCCTT
CGACAGGAGAGCTGCAGTCTCTTAGACTAGAGCAGGACGG
GGCAGATCTTCCAGCTCCACTAAATACTGCTTCTGGCACA
AGCACCAGAGACGGTCCCACTGGTCTGCGCGAGGCAGCTC
TCTACCCACACCTTCCTCAAGATGCAGACCCTAGGCTGGT
GGAGTCTCTGTCTCAGATGCTCTCCATGGGTTTCACCGAT
GAGGGTGGATGGCTAACCAGACTGCTCCACACCAAGAATT
ACGACATCGGTGGTGCTCTGGACACCATCCAGTACTCCAA
AACACCAGGACAACAGAAGTAGAGGTGGAGCACAGGAATA
CAGAAGACCTGGGCCATACTTAATATTTGAAGCTTCTGGC
CTATTTTCTAACTTAGTCTTTCTATACTTTTAAAATGATA
AATTTCCACAAATATTAACAATATCAATTACTCAGGTGAC
TAGTACATAGTTAAGTTCATCATTGGGCTTATATATGCAA
AATGTTTGTCTTTAGCTTAACACTTGACATTATAAAGAAC
ATTATTTTCATGTATGCATAATATTACGTAAAGGTTGTTA
AGTAGAGATCTATATTTGTGCAACTTCACTTTATGGATTT
TCTGTTTGCATAATCAATAAGCAGTTTCTAGATCAAGCAT
AAACCTGGAGGGTTTGTTAGTTTGAATAAACAGATGGAAT
CGGATTAATGTCGCTGTTGGTCTTCTAAAATTCCTGTCTT
TTCTATCTACAATAAAACACTTCTCTAAAACA

Related Transcripts

Transcripts related to sqstm1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	sqstm1-202 (1) Ensembl	Havana	1939 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sqstm1-003 (1) Ensembl	Havana	531 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sqstm1-004 (1) Ensembl	Havana	1010 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations