Gene

tbx16

ID
ZDB-GENE-990615-5
Name
T-box transcription factor 16
Symbol
tbx16 Nomenclature History
Previous Names
  • cb103 (1)
  • id:ibd2185 (1)
  • spadetail
  • spt-1 (1)
  • spt (1)
  • wu:fa17g07 (1)
  • ZF-SPT (1)
  • zgc:109817
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Exhibits transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including animal organ development; blood vessel morphogenesis; and regulation of embryonic development. Localizes to nuclear chromatin. Is expressed in several structures, including forerunner cell group; germ ring; mesoderm; presumptive mesoderm; and spinal cord.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
91 figures from 64 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
61 figures from 34 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tbx16 Human Ortholog
No data available
Associated With tbx16 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018186 Transcription factor, T-box, conserved site
Domain IPR046360 T-box transcription factor, DNA-binding domain
Family IPR001699 T-box transcription factor
Homologous_superfamily IPR008967 p53-like transcription factor, DNA-binding domain superfamily
Homologous_superfamily IPR036960 T-box superfamily
Domain Details Per Protein
Protein Length p53-like transcription factor, DNA-binding domain superfamily T-box superfamily T-box transcription factor T-box transcription factor, DNA-binding domain Transcription factor, T-box, conserved site
UniProtKB:O93389 470
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tbx16-201 (1) Ensembl 4,949 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
AB3-tbx16 monoclonal IgG2a Mouse
1
Ab2-tbx16 polyclonal Mouse
  • IHC
3
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations