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General Information
ZIRC
ZFIN ID: ZDB-GENE-990415-236
Gene Name: retinal homeobox gene 1
Gene Symbol: rx1
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity. Involved in camera-type eye photoreceptor cell differentiation and retina layer formation. Predicted to localize to the nucleus. Human  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH rx1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
isolated microphthalmia 3 Microphthalmia, isolated 3 611038
DISEASE ASSOCIATED WITH rx1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process camera-type eye photoreceptor cell differentiation (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 8)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA rx1-002 (1) 938
mRNA rx1-201 (1) 2884
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM rx1 No data available
MARKER RELATIONSHIPS
rx1Contained in: [BAC] CH211-63J24 (1) (order this)
rx1Encodes: [cDNA] MGC:73026 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_131225 (1) 2885bp
Genomic GenBank:CR936300 (1) 158446bp
Select Tool
Polypeptide UniProtKB:O42356 (1) 330aa
Sequence Clusters UniGene:75761 (1)
Sequence Information (all 12)
ORTHOLOGY for rx1 (Chr: 22)
CITATIONS (87)