ZFIN ID: ZDB-GENE-980526-144
Gene Name: hairy-related 6
Gene Symbol: her6
Sequence Ontology ID : SO:0000704

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Previous Names: cb129 (1), Hes1b (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
GENE EXPRESSION
All Expression Data: 46 figures from 32 publications
Directly Submitted Expression Data: 6 figures (41 images) from Thisse et al., 2001 [cb129]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
  alar plate midbrain region, anatomical structure, axis, brain (all 68) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
el633 Small Deletion Unknown Unknown TALEN
sa59 Point Mutation Unknown Unknown ENU
sa20748 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38559 Point Mutation Unknown Splice Site ENU
    Targeting reagents: MO1-her6 (1), MO2-her6 (1), MO3-her6 (1), TALEN1-her6 (1)
    PHENOTYPE
    Data: Fig. 4 from Coolen et al., 2012
    Observed in: hindbrain cell proliferation in hindbrain ventricular zone
    DISEASE ASSOCIATED WITH her6 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Notch signaling pathway (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003650
  • InterPro:IPR011598
  • PROSITE:PS50888
  • PROSITE:PS51054
  • Pfam:PF00010
  • Pfam:PF07527
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA her6-001 (1) 1426
    ncRNA her6-002 (1) 788
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM her6
    tg(her6-mmu.fos:gfp)
    MARKER RELATIONSHIPS
    her6Contained in: [BAC] DKEY-111K7 (1) (order this)
    her6Encodes: [EST] cb129 (1) (order this)
    [cDNA] MGC:73203 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131079 (1) 1376bp
    Genomic GenBank:BX950188 (1) 260558bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q90468 334aa
    Sequence Clusters UniGene:75065 (1)
    Sequence Information (all 17)
    OTHER her6 GENE PAGES
  • Alliance (1)
  • Gene:30288 (1)
  • VEGA:OTTDARG00000026123 (1)
  • Ensembl(GRCz10):ENSDARG00000006514 (1)
  • ORTHOLOGY for her6 (Chr: 6)
    CITATIONS (95)