ZFIN ID: ZDB-GENE-071205-8
Gene Name: FXYD domain containing ion transport regulator 6 like
Gene Symbol: fxyd6l    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Predicted to have sodium channel regulator activity. Predicted to be involved in regulation of sodium ion transmembrane transporter activity. Predicted to localize to integral component of membrane. Is expressed in otic vesicle. Orthologous to human FXYD1 (FXYD domain containing ion transport regulator 1).
Genome Resources: Alliance (1),  Gene:566443 (1),  Ensembl(GRCz11):ENSDARG00000097057 (1)
GENE EXPRESSION
All Expression Data: Fig. TS3 from Gabashvili et al., 2007
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH fxyd6l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH fxyd6l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ion transport (more)
Cellular Component integral component of membrane (more)
Molecular Function ion channel regulator activity (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA fxyd6l-201 (1)    Ensembl 320
fxyd6l-202 (1)    Ensembl 813
fxyd6l-203 (1)    Ensembl 376
fxyd6l-204 (1)    Ensembl 396
fxyd6l-205 (1)    Ensembl 998
fxyd6l-206 (1)    Ensembl 360
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM fxyd6l No data available
MARKER RELATIONSHIPS
fxyd6l Contained in: [BAC] DKEY-56F14 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001201417 (1) 1107 nt
Genomic GenBank:CR848666 (1) 106065 nt
Select Tool
Polypeptide UniProtKB:X1WE12 (1) 83 aa
Sequence Information (all 36)
ORTHOLOGY for fxyd6l ( Chr: 16 )
CITATIONS (12)