ZFIN ID: ZDB-GENE-071120-4
Gene Name: TNF receptor-associated factor 1
Gene Symbol: traf1    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name:

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have tumor necrosis factor receptor binding activity and ubiquitin protein ligase binding activity. Predicted to be involved in protein K63-linked ubiquitination; regulation of intracellular signal transduction; and tumor necrosis factor-mediated signaling pathway. Predicted to localize to cytoplasmic side of plasma membrane and plasma membrane signaling receptor complex. Orthologous to human TRAF1 (TNF receptor associated factor 1).
Genome Resources: Alliance (1),  Gene:100148503 (1),  Ensembl(GRCz11):ENSDARG00000069482 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21216 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH traf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH traf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of apoptotic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA traf1-201 (1)    Ensembl 2220
    traf1-202 (1)    Ensembl 894
    traf1-203 (1)    Ensembl 884
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM traf1 No data available
    MARKER RELATIONSHIPS
    traf1 Contained in: [BAC] DKEYP-51B7 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001128381 (1) 2220 nt
    Genomic GenBank:CR376844 (1) 203472 nt Blast at MegaBLAST
    Polypeptide UniProtKB:B0UXK1 (1) 551 aa
    Sequence Information (all 9)
    ORTHOLOGY for traf1 ( Chr: 8 )
    CITATIONS (21)