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General Information
ZIRC
ZFIN ID: ZDB-GENE-070912-689
Gene Name: collagen, type XV, alpha 1b
Gene Symbol: col15a1b    Nomenclature History

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Previous Names: cb491 (1), col15a1, mz98 (1), sb:cb491, si:dkeyp-93c5.1, wu:fb50f05, wu:fc22d09

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have extracellular matrix structural constituent. Involved in eye development and regulation of motor neuron axon guidance. Predicted to localize to the extracellular matrix and extracellular space. Is expressed in several structures, including aortic arch; digestive system; nervous system; neural plate; and neural tube. Orthologous to human COL15A1 (collagen type XV alpha 1 chain).
Genome Resources: Alliance (1),  Gene:558137 (1),  Ensembl(GRCz11):ENSDARG00000061848 (2)
DISEASE ASSOCIATED WITH col15a1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH col15a1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process eye development (more)
Cellular Component collagen trimer (more)
Molecular Function extracellular matrix structural constituent (more)
GO Terms (all 7)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA col15a1b-202 (1)    Ensembl 4560
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab1-col15a1b polyclonal Rabbit IHC 1
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM col15a1b No data available
MARKER RELATIONSHIPS
col15a1b Contained in: [BAC] CH211-88C5 (1) (order this), DKEYP-93C5 (1), DKEYP-99C4 (1)
col15a1b Encodes: [EST] cb491 (1) (order this), fb50f05, fc22d09, IMAGE:7158238 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001172370 (1) 3510 bp
Genomic GenBank:CR788285 (1) 153408 bp
Select Tool
Polypeptide UniProtKB:A0A0A1I9R6 (1) 1245 aa
Sequence Clusters UniGene:77010 (1)
Sequence Information (all 40)
ORTHOLOGY for col15a1b ( Chr: 2 )
CITATIONS (37)