ZFIN ID: ZDB-GENE-051113-152
Gene Name: Hermansky-Pudlak syndrome 1
Gene Symbol: hps1
Sequence Ontology ID : SO:0000704

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Previous Names: im:7143944, zgc:123240

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Directly Submitted Expression Data: 4 figures (5 images) from Thisse et al., 2004 [IMAGE:7143944]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
  optic vesicle, pancreas, pancreatic bud, retina (all 6) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1853 Point Mutation Unknown Splice Site ENU
sa17216 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35570 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa42277 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hps1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Hermansky-Pudlak syndrome 1 Hermansky-Pudlak syndrome 1 203300
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR026053 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hps1-001 (1) 4642
    ncRNA hps1-002 (1) 827
    mRNA hps1-003 (1) 310
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hps1 No data available
    MARKER RELATIONSHIPS
    hps1Contained in: [BAC] DKEYP-34H12 (1)
    hps1Encodes: [EST] IMAGE:7143944 (1) (order this)
    [cDNA] MGC:123240 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001037688 (1) 2370bp
    Genomic GenBank:BX294129 (1) 156627bp
    Select Tool
    Polypeptide UniProtKB:B8A4P3 (1) 668aa
    Sequence Clusters UniGene:88180 (1)
    Sequence Information (all 13)
    OTHER hps1 GENE PAGES
  • Alliance (1)
  • Gene:563067 (1)
  • VEGA:OTTDARG00000022907 (1)
  • Ensembl(GRCz10):ENSDARG00000026170 (1)
  • ORTHOLOGY for hps1 (Chr: 13)
    CITATIONS (16)