ZFIN ID: ZDB-GENE-051113-152
Gene Name: Hermansky-Pudlak syndrome 1
Gene Symbol: hps1
Sequence Ontology ID : SO:0000704

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Previous Names: im:7143944, zgc:123240

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Directly Submitted Expression Data: 4 figures (5 images) from Thisse et al., 2004 [IMAGE:7143944]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1853 Point Mutation Unknown Splice Site ENU
sa17216 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35570 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42277 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hps1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Hermansky-Pudlak syndrome 1 Hermansky-Pudlak syndrome 1 203300
    DISEASE ASSOCIATED WITH hps1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR026053 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hps1-001 (1) 4642
    ncRNA hps1-002 (1) 827
    mRNA hps1-003 (1) 310
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hps1 No data available
    MARKER RELATIONSHIPS
    hps1Contained in: [BAC] DKEYP-34H12 (1)
    hps1Encodes: [EST] IMAGE:7143944 (1) (order this)
    [cDNA] MGC:123240 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001037688 (1) 2370bp
    Genomic GenBank:BX294129 (1) 156627bp
    Select Tool
    Polypeptide UniProtKB:F6PFK5 (1) 668aa
    Sequence Clusters UniGene:88180 (1)
    Sequence Information (all 12)
    OTHER hps1 GENE PAGES
  • Alliance (1)
  • Gene:563067 (1)
  • VEGA:OTTDARG00000022907 (1)
  • Ensembl(GRCz11):ENSDARG00000026170 (1)
  • ORTHOLOGY for hps1 (Chr: 13)
    CITATIONS (16)