ZFIN ID: ZDB-GENE-050417-474
Gene Name: SP110 nuclear antigen, tandem duplicate 4
Gene Symbol: sp100.4    Nomenclature History

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Previous Names: zgc:113411 (1), zgc:173656

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have DNA binding activity and metal ion binding activity. Human ortholog(s) of this gene implicated in tuberculosis. Orthologous to human SP110 (SP110 nuclear body protein) and SP140L (SP140 nuclear body protein like).
Genome Resources: Alliance (1),  Gene:550611 (1),  Ensembl(GRCz11):ENSDARG00000038133 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:113411]
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33167 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-sp100.4 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sp100.4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sp100.4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function DNA binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:113411-201 (1)    Ensembl 1810
    zgc:113411-202 (1)    Ensembl 477
    ncRNA zgc:113411-003 (1)    Ensembl 994
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sp100.4 No data available
    MARKER RELATIONSHIPS
    sp100.4 Contained in: [BAC] DKEY-68O6 (1) (order this)
    sp100.4 Encodes: [cDNA] MGC:113411 (1), MGC:173656 (1), MGC:174668 (1), MGC:191684 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001105120 (1) 1744 nt
    Genomic GenBank:BX569789 (1) 244662 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QK64 (1) 415 aa
    Sequence Information (all 32)
    ORTHOLOGY for sp100.4 ( Chr: 3 )
    CITATIONS (18)