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ZIRC
ZFIN ID: ZDB-GENE-041219-3
Gene Name: COMM domain containing 3
Gene Symbol: commd3
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:103771

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in sodium ion transport. Orthologous to human COMMD3 (COMM domain containing 3).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103771]
  6 figures (6 images) from Rauch et al., 2003 [fb80a06]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39440 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH commd3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH commd3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process sodium ion transport (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR017920 (1)
  • InterPro:IPR037355 (1)
  • PROSITE:PS51269 (1)
  • Pfam:PF07258 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA commd3-002 (1) 576
    commd3-003 (1) 663
    mRNA commd3-201 (1) 780
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM commd3 No data available
    MARKER RELATIONSHIPS
    commd3Contained in: [BAC] CH211-14G13 (1) (order this)
    commd3Encodes: [EST] fb80a06 (1) (order this)
    [cDNA] MGC:103771 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001008734 (1) 794bp
    Genomic GenBank:CR376737 (1) 158366bp
    Select Tool
    Polypeptide UniProtKB:F1RE23 (1) 192aa
    Sequence Clusters UniGene:77370 (1)
    Sequence Information (all 11)
    ORTHOLOGY for commd3 (Chr: 24)
    CITATIONS (19)