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ZIRC
ZFIN ID: ZDB-GENE-041212-84
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Gene Name: cyclin-dependent kinase 20
Gene Symbol: cdk20    Nomenclature History

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Previous Names: ccrk (1), zgc:101530

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have cyclin-dependent protein serine/threonine kinase activity. Involved in cilium assembly. Predicted to localize to the nucleus. Orthologous to human CDK20 (cyclin dependent kinase 20).
Genome Resources: Alliance (1),  Gene:494112 (1),  Ensembl(GRCz11):ENSDARG00000003867 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101530]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-cdk20 N/A 2
MO2-cdk20 N/A 2
PHENOTYPE
Data: Fig. 7 from Ko et al., 2010
Observed in:
DISEASE ASSOCIATED WITH cdk20 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cdk20 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cilium assembly (more)
Cellular Component cell projection (more)
Molecular Function ATP binding (more)
GO Terms (all 17)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000719 (1)
  • InterPro:IPR008271 (1)
  • InterPro:IPR011009 (1)
  • InterPro:IPR017441 (1)
  • PROSITE:PS00107 (1)
  • PROSITE:PS00108 (1)
  • PROSITE:PS50011 (1)
  • Pfam:PF00069 (1)
  • EC:2.7.11.22 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cdk20-201 (1)    Ensembl 1482
    Select Tool
    cdk20-202 (1)    Ensembl 602
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdk20 No data available
    MARKER RELATIONSHIPS
    cdk20 Contained in: [BAC] DKEYP-77F7 (1)
    cdk20 Encodes: [cDNA] MGC:101530 (1) (order this), MGC:191770 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001008655 (1) 1507 bp
    Select Tool
    Genomic GenBank:BX571687 (1) 173448 bp
    Select Tool
    Polypeptide UniProtKB:A8WIP6 (1) 344 aa
    Select Tool
    Sequence Clusters UniGene:37814 (1)
    Sequence Information (all 22)
    ORTHOLOGY for cdk20 ( Chr: 8 )
    CITATIONS (20)