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ZIRC
ZFIN ID: ZDB-GENE-041014-161
Gene Name: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2
Gene Symbol: st6galnac1.2    Nomenclature History

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Previous Names: st6galnac1-r2 (1), si:ch211-51n14.2

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have sialyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to localize to the Golgi apparatus and integral component of membrane. Orthologous to human ST6GALNAC1 (ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1).
Genome Resources: Alliance (1),  Gene:799868 (1),  Ensembl(GRCz11):ENSDARG00000043816 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7162067]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2629 Point Mutation Unknown Premature Stop ENU
sa2651 Point Mutation Unknown Premature Stop ENU
sa14861 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22086 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24910 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH st6galnac1.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH st6galnac1.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein glycosylation (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function sialyltransferase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001675 (1)
  • InterPro:IPR038578 (1)
  • Pfam:PF00777 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA st6galnac1.2-201 (1)    Ensembl 1765
    st6galnac1.2-203 (1)    Ensembl 942
    st6galnac1.2-204 (1)    Ensembl 727
    ncRNA st6galnac1.2-002 (1) 469
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM st6galnac1.2 No data available
    MARKER RELATIONSHIPS
    st6galnac1.2 Contained in: [BAC] CH211-51N14 (1) (order this)
    st6galnac1.2 Encodes: [EST] IMAGE:7162067 (1) (order this)
    [cDNA] MGC:171994 (1) (order this), MGC:174568 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082934 (1) 1765 bp
    Genomic GenBank:CR385044 (1) 59170 bp
    Select Tool
    Polypeptide UniProtKB:G8B2R1 (1) 427 aa
    Sequence Clusters UniGene:83479 (1)
    Sequence Information (all 23)
    ORTHOLOGY for st6galnac1.2 ( Chr: 12 )
    CITATIONS (22)