ZFIN ID: ZDB-GENE-041011-1
Gene Name: lin-7 homolog B (C. elegans)
Gene Symbol: lin7b
Sequence Ontology ID : SO:0000704

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Previous Names: fj41b11, fj63g03, wu:fj41b11, wu:fj63g03, zgc:109997

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have L27 domain binding activity; predicted to be involved in neurotransmitter secretion and protein localization to basolateral plasma membrane; predicted to localize to the cell-cell  ...
GENE EXPRESSION
All Expression Data: 10 figures from 3 publications
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2004 [MGC:109997]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH lin7b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH lin7b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process exocytosis (more)
Cellular Component cell junction (more)
Molecular Function L27 domain binding (more)
GO Terms (all 14)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001478 (1)
  • InterPro:IPR004172 (1)
  • InterPro:IPR014775 (1)
  • InterPro:IPR017365 (1)
  • InterPro:IPR036034 (1)
  • InterPro:IPR036892 (1)
  • PROSITE:PS50106 (1)
  • PROSITE:PS51022 (1)
  • Pfam:PF00595 (1)
  • Pfam:PF02828 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lin7b-201 (1) 1587
    lin7b-202 (1) 1425
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lin7b No data available
    MARKER RELATIONSHIPS
    lin7bContained in: [BAC] DKEY-15N1 (1) (order this)
    lin7bEncodes: [EST] fj41b11 (1), fj63g03 (1)
    [cDNA] MGC:109997 (1) (order this), MGC:192979 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020733 (1) 1558bp
    Genomic GenBank:BX324157 (1) 272769bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1RDK3 (1) 220aa
    Sequence Clusters UniGene:81045 (1)
    Sequence Information (all 22)
    OTHER lin7b GENE PAGES
  • Alliance (1)
  • Gene:553768 (1)
  • VEGA:OTTDARG00000019969 (1)
  • Ensembl(GRCz11):ENSDARG00000037932 (2)
  • ORTHOLOGY for lin7b (Chr: 3)
    CITATIONS (24)