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ZIRC
ZFIN ID: ZDB-GENE-040801-175
Gene Name: D-aminoacyl-tRNA deacylase 1
Gene Symbol: dtd1    Nomenclature History

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Attributions

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Previous Names: hars2, zgc:92657

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have D-tyrosyl-tRNA(Tyr) deacylase activity. Predicted to be involved in tRNA metabolic process. Predicted to localize to the cytoplasm. Orthologous to human DTD1 (D-aminoacyl-tRNA deacylase 1).
Genome Resources: Alliance (1),  Gene:445046 (1),  Ensembl(GRCz11):ENSDARG00000044628 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92657]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH dtd1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH dtd1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process tRNA metabolic process (more)
Cellular Component cytoplasm (more)
Molecular Function aminoacyl-tRNA editing activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003732 (1)
  • InterPro:IPR023509 (1)
  • Pfam:PF02580 (1)
  • EC:3.1.1.- (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA dtd1-201 (1)    Ensembl 1331
    ncRNA dtd1-002 (1)    Ensembl 916
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM dtd1 No data available
    MARKER RELATIONSHIPS
    dtd1 Contained in: [BAC] CH211-85N16 (1) (order this)
    dtd1 Encodes: [cDNA] MGC:92657 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003440 (1) 930 bp
    Genomic GenBank:AL929341 (1) 166228 bp
    Select Tool
    Polypeptide UniProtKB:F1QGC8 (1) 207 aa
    Sequence Clusters UniGene:33940 (1)
    Sequence Information (all 10)
    ORTHOLOGY for dtd1 ( Chr: 6 )
    CITATIONS (20)