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ZIRC
ZFIN ID: ZDB-GENE-040426-2500
Gene Name: ligand of numb-protein X 2b
Gene Symbol: lnx2b
Sequence Ontology ID : SO:0000704

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Previous Names: lnx-l (1), id:ibd3184, lnx-like (1), zgc:85925 (1)

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits ubiquitin-protein transferase activity. Involved in exocrine pancreas development and protein K48-linked ubiquitination. Orthologous to human LNX2 (ligand of numb-protein X 2).
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010014Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la012572Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la018980Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la018981Tg Transgenic Insertion Unknown Unknown DNA
    la027546Tg Transgenic Insertion Unknown Unknown DNA
    Targeting reagents:
    PHENOTYPE
    Data: 3 figures from Ro et al., 2009
    Observed in:
    DISEASE ASSOCIATED WITH lnx2b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lnx2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein K48-linked ubiquitination (more)
    Cellular Component cellular_component (more)
    Molecular Function ubiquitin-protein transferase activity (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA lnx2b-002 (1) 394
    mRNA lnx2b-201 (1) 3150
    lnx2b-202 (1) 572
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM lnx2b No data available
    MARKER RELATIONSHIPS
    lnx2bContained in: [BAC] CH211-231B5 (1) (order this), CH211-276G21 (1) (order this)
    lnx2bEncodes: [EST] ibd3184 (1) (order this)
    [cDNA] MGC:85925 (1) (order this), MGC:162185 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212940 (1) 3201bp
    Genomic GenBank:AL935131 170938bp
    Select Tool
    Polypeptide UniProtKB:A4VCF7 (1) 678aa
    Sequence Clusters UniGene:30341 (1)
    Sequence Information (all 25)
    ORTHOLOGY for lnx2b (Chr: 14)
    CITATIONS (30)