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ZIRC
ZFIN ID: ZDB-GENE-040426-2132
Gene Name: matrix metallopeptidase 9
Gene Symbol: mmp9
Sequence Ontology ID : SO:0000704

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Previous Names: fj05a08, gelatinase B (1), wu:fb02g06 (1), wu:fb07b05 (1), wu:fi98c09 (1), wu:fj05a08 (1), zgc:64165

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metalloendopeptidase activity. Involved in several processes, including collagen fibril organization; fin regeneration; and positive regulation of granuloma formation. Predicted to  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
el734 Small Deletion Unknown Unknown CRISPR
mi5003 Small Deletion Exon 2 Unknown CRISPR
mi5004 Insertion Exon 2 Unknown CRISPR
sa12776 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34399 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH mmp9 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Metaphyseal anadysplasia 2 613073
    DISEASE ASSOCIATED WITH mmp9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to bacterium (more)
    Cellular Component extracellular matrix (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 20)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA mmp9-002 (1) 583
    mRNA mmp9-201 (1) 2785
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    mmp9Contained in: [BAC] CH211-269M15 (1) (order this)
    mmp9Contains: [SNP] rs3728152 (1), rs3728153 (1), rs3728154 (1)
    mmp9Encodes: [EST] fb02g06 (1), fb07b05 (1), fi98c09 (1), fj05a08
    [cDNA] MGC:64165 (1) (order this), MGC:175074 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213123 (1) 2790bp
    Genomic GenBank:CR391966 (1) 105854bp
    Select Tool
    Polypeptide UniProtKB:F1QC76 (1) 680aa
    Sequence Clusters UniGene:76275 (1)
    Sequence Information (all 33)
    ORTHOLOGY for mmp9 (Chr: 8)
    CITATIONS (215)