Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2009
Gene Name: ubiquitin-like modifier activating enzyme 1
Gene Symbol: uba1
Previous Names: ube1 (1), fb30f01, wu:fa01e08, wu:fb30f01, wu:fi21c11, wu:fj14g11, zgc:66143
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66143]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: la011054Tg, sa15137
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Spinal muscular atrophy, X-linked 2, infantile 301830
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular protein modification process (more)
Molecular Function ATP binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000011 (1)
  • InterPro:IPR000127 (1)
  • InterPro:IPR000594 (1)
  • InterPro:IPR009036 (1)
  • InterPro:IPR016040 (1)
  • InterPro:IPR018074 (1)
  • InterPro:IPR018075 (1)
  • InterPro:IPR018965 (1)
  • InterPro:IPR019572 (1)
  • InterPro:IPR023280 (1)
  • PROSITE:PS00865 (1)
  • Pfam:PF00899 (1)
  • Pfam:PF02134 (1)
  • Pfam:PF09358 (1)
  • Pfam:PF10585 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA uba1-001 (1) 4223
    uba1-002 (1) 398
    uba1-003 (1) 862
    ncRNA uba1-004 (1) 810
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM uba1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    uba1 Contained in: [BAC] CH211-112C15 (1) (order this)
    uba1 Encodes: [EST] fa01e08 (1), fb30f01 (1), fi21c11 (1), fj14g11 (1)
    [cDNA] MGC:66143 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213062 (1) 4156 bp
    Genomic GenBank:CR339046 (1) 170974 bp
    Select Tool
    Polypeptide UniProtKB:F1RCA1 (1) 1058 aa
    Sequence Clusters UniGene:75314 (1)
    Sequence Information (all 23)
    OTHER uba1 GENE PAGES
  • Gene:406335 (1)
  • VEGA:OTTDARG00000021287 (1)
  • Ensembl(Zv9):ENSDARG00000037559 (1)
  • MAPPING INFORMATION
    Chr: 23 Details View Map: Merged   Individual Panels
    ORTHOLOGY
      Evidence
    Species Symbol Chromosome (Position) Accession # AA
    Zebrafish uba1 23  
    Human UBA1 X (Xp11.23)
  • OMIM:314370
  • Gene:7317
  • CITATIONS (22)