ZFIN ID: ZDB-GENE-040426-1960
Gene Name: ATPase, H+ transporting, lysosomal accessory protein 2
Gene Symbol: atp6ap2

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Previous Names: pn (1), pekin (1), wu:fj36c03, wu:fq15e04, zgc:73194

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 3 publications
Directly Submitted Expression Data: 4 figures (7 images) from Thisse et al., 2004 [MGC:73194]
  4 figures (14 images) from Rauch et al., 2003 [fq15e04]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  brain, central nervous system, epiphysis, forebrain (all 12) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi3681Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • p250 Point Mutation Unknown Unknown ENU
    sa37444 Point Mutation Unknown Splice Site ENU
    Targeting reagents: MO1-atp6ap2 (1), MO2-atp6ap2 (1), MO3-atp6ap2 (1)
    PHENOTYPE
    Data: 5 figures from 3 publications
    Observed in: anatomical system, bile ductule, brain, central nervous system (all 27) expand
    DISEASE ASSOCIATED WITH atp6ap2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Mental retardation, X-linked, syndromic, Hedera type 300423
    ?Parkinsonism with spasticity, X-linked 300911
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intrahepatic bile duct development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function receptor activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012493 (1)
  • Pfam:PF07850 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp6ap2-001 (1) 1619
    atp6ap2-002 (1) 841
    atp6ap2-003 (1) 658
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp6ap2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp6ap2Contained in: [BAC] DKEY-119G10 (1) (order this)
    atp6ap2Encodes: [EST] fj36c03 (1), fq15e04 (1) (order this)
    [cDNA] MGC:73194 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213023 (1) 1627bp
    Genomic GenBank:BX649485 (1) 77573bp
    Select Tool
    Polypeptide UniProtKB:F1QIH1 (1) 386aa
    Sequence Clusters UniGene:120094 (1)
    Sequence Information (all 20)
    OTHER atp6ap2 GENE PAGES
  • Gene:406296 (1)
  • VEGA:OTTDARG00000009490 (1)
  • Ensembl(GRCz10):ENSDARG00000008735 (1)
  • ORTHOLOGY for atp6ap2 (Chr: 22)
    Species Symbol Chromosome Accession # Evidence
    Human ATP6AP2 X
  • Gene:10159
  • OMIM:300556
  • HGNC:18305
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (24)