ZFIN ID: ZDB-GENE-030826-15
Gene Name: HIG1 hypoxia inducible domain family, member 1A
Gene Symbol: higd1a    Nomenclature History

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Previous Names: hig1, cb659 (1), wu:fb57h02

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to be involved in mitochondrial respirasome assembly. Predicted to localize to mitochondrion. Is expressed in several structures, including axis; gill; musculature system; solid lens vesicle; and spleen. Orthologous to several human genes including HIGD1A (HIG1 hypoxia inducible domain family member 1A).
Genome Resources: Alliance (1),  Gene:373084 (1),  Ensembl(GRCz11):ENSDARG00000022303 (2)
GENE EXPRESSION
All Expression Data: 8 figures from 3 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2001 [cb659]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14226 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32823 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH higd1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH higd1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mitochondrial respirasome assembly (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA higd1a-201 (1)    Ensembl 1263
    ncRNA higd1a-002 (1)    Ensembl 744
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM higd1a No data available
    MARKER RELATIONSHIPS
    higd1a Contained in: [BAC] CH73-264D1 (1), CH211-163F10 (1)
    higd1a Encodes: [EST] cb659 (1) (order this), fb57h02 (1)
    [cDNA] MGC:77692 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200100 (1) 1240 nt
    Genomic GenBank:AL929518 (1) 162473 nt
    Select Tool
    Polypeptide UniProtKB:Q7ZZZ4 (1) 99 aa
    Sequence Information (all 18)
    ORTHOLOGY for higd1a ( Chr: 2 )
    CITATIONS (26)