ZFIN ID: ZDB-GENE-030711-3
Gene Name: ATPase, H+ transporting, lysosomal, V1 subunit B, member a
Gene Symbol: atp6v1ba
Previous Names: fb52g11, vatB1 (1), cb927 (1), wu:fb52g11 (1)
Location: Chr: 17   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 6 figures (15 images) from Thisse et al., 2001 [cb927]
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
  cardiovascular system, central nervous system, cranial nerve II, diencephalon (all 18) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: la013065Tg, sa23052
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ATP hydrolysis coupled proton transport (more)
Cellular Component proton-transporting V-type ATPase, V1 domain (more)
Molecular Function ATP binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000194 (1)
  • InterPro:IPR000793 (1)
  • InterPro:IPR004100 (1)
  • InterPro:IPR005723 (1)
  • InterPro:IPR020003 (1)
  • InterPro:IPR022879 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS00152 (1)
  • Pfam:PF00006 (1)
  • Pfam:PF00306 (1)
  • Pfam:PF02874 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp6v1ba-001 (1) 2547
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp6v1ba No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp6v1ba Contained in: [BAC] CH73-36G21 (1) (order this)
    atp6v1ba Encodes: [EST] cb927 (1) (order this), fb52g11 (1)
    [cDNA] MGC:73083 (1) (order this), MGC:86710 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_182878 (1) 2484 bp
    Genomic GenBank:CT574588 (1) 120853 bp
    Select Tool
    Polypeptide UniProtKB:Q6PC68 (1) 506 aa
    Sequence Clusters UniGene:75462 (1)
    Sequence Information (all 19)
    OTHER atp6v1ba GENE PAGES
  • Gene:359839 (1)
  • VEGA:OTTDARG00000034984 (1)
  • Ensembl(Zv9):ENSDARG00000013443 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA
    Zebrafish atp6v1ba 17  
    Human ATP6V1B2 8 (8p21.3)
  • OMIM:606939
  • Gene:526
  • Orthology Details
    CITATIONS (24)