ZFIN ID: ZDB-GENE-030711-3
Gene Name: ATPase, H+ transporting, lysosomal, V1 subunit B, member a
Gene Symbol: atp6v1ba
Previous Names: vatB1 (1), cb927 (1), fb52g11, wu:fb52g11 (1)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 6 figures (15 images) from Thisse et al., 2001 [cb927]
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
  cardiovascular system, central nervous system, cranial nerve II, diencephalon (all 19) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013065Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23052 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36389 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atp6v1ba HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Zimmermann-Laband syndrome 2 616455
    Deafness, congenital, with onychodystrophy, autosomal dominant 124480
    Deafness, congenital, with onychodystrophy, autosomal dominant 124480
    Zimmermann-Laband syndrome 2 616455
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ATP hydrolysis coupled proton transport (more)
    Cellular Component proton-transporting V-type ATPase, V1 domain (more)
    Molecular Function ATP binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000194 (1)
  • InterPro:IPR004100 (1)
  • InterPro:IPR005723 (1)
  • InterPro:IPR020003 (1)
  • InterPro:IPR022879 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS00152 (1)
  • Pfam:PF00006 (1)
  • Pfam:PF02874 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp6v1ba-001 (1) 2547
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp6v1ba No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp6v1baContained in: [BAC] CH73-36G21 (1) (order this)
    atp6v1baEncodes: [EST] cb927 (1) (order this), fb52g11 (1)
    [cDNA] MGC:73083 (1) (order this), MGC:86710 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_182878 (1) 2484bp
    Genomic GenBank:CT574588 (1) 120853bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ITB1 (1) 506aa
    Sequence Clusters UniGene:75462 (1)
    Sequence Information (all 20)
    OTHER atp6v1ba GENE PAGES
  • Gene:359839 (1)
  • VEGA:OTTDARG00000034984 (1)
  • Ensembl(GRCz10):ENSDARG00000013443 (1)
  • ORTHOLOGY for atp6v1ba (Chr: 17)
    Species Symbol Chromosome Accession # Evidence
    Human ATP6V1B2 8
  • Gene:526
  • OMIM:606939
  • HGNC:854
  • Amino acid sequence comparison (1)
    Download Curated Orthology
    CITATIONS (24)