ZFIN ID: ZDB-GENE-030131-9685
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Symbol: ddx18
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: cb155 (1), fa19d11, sb:cb155, wu:fa19d11 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2001 [cb155]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Long-pec (48.0h-60.0h)
  alar plate midbrain region, blood island, brain, cerebellum (all 26) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1727Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026969Tg Transgenic Insertion Unknown Unknown DNA
    la026970Tg Transgenic Insertion Unknown Unknown DNA
    sa15400 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31736 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa31737 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-ddx18 (1), MO2-ddx18 (1)
    PHENOTYPE
    Data: 10 figures from 3 publications
    Observed in: apoptotic process, blood island hematopoietic stem cell, brain, central nervous system (all 20) expand
    DISEASE ASSOCIATED WITH ddx18 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process hemopoiesis (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000629
  • InterPro:IPR001650
  • InterPro:IPR011545
  • InterPro:IPR014001
  • InterPro:IPR014014
  • InterPro:IPR025313
  • InterPro:IPR027417
  • PROSITE:PS00039
  • PROSITE:PS51192
  • PROSITE:PS51194
  • PROSITE:PS51195
  • Pfam:PF00270
  • Pfam:PF00271
  • Pfam:PF13959
  • EC:3.6.4.13
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ddx18-001 (1) 2780
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Ab1-ddx18 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ddx18 No data available
    MARKER RELATIONSHIPS
    ddx18Contained in: [BAC] DKEYP-68F9 (1)
    ddx18Encodes: [EST] cb155 (1) (order this), fa19d11, wz9183
    [cDNA] MGC:111813 (1) (order this), MGC:192725 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003411 (1) 2167bp
    Genomic GenBank:BX001051 (1) 213486bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QLW8 653aa
    Sequence Clusters UniGene:24235 (1)
    Sequence Information (all 21)
    OTHER ddx18 GENE PAGES
  • Alliance (1)
  • Gene:321127 (1)
  • VEGA:OTTDARG00000020904 (1)
  • Ensembl(GRCz10):ENSDARG00000030789 (1)
  • ORTHOLOGY for ddx18 (Chr: 9)
    CITATIONS (33)