ZFIN ID: ZDB-GENE-030131-7190
Gene Name: methyl CpG binding protein 2
Gene Symbol: mecp2
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fk96a04, zgc:111857

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding activity transcription factor activity; involved in several processes, including locomotory behavior, nervous system development, and neuromuscular junction development;  ...
GENE EXPRESSION
All Expression Data: 7 figures from 7 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:111857]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh232 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026687Tg Transgenic Insertion Unknown Unknown DNA
    mecp2_unrecovered Point Mutation Unknown Unknown ENU
    sa21196 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 24 figures from 6 publications
    Observed in:
    DISEASE ASSOCIATED WITH mecp2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Rett syndrome Rett syndrome 312750
    Rett syndrome, atypical 312750
    Rett syndrome, preserved speech variant 312750
    syndromic X-linked intellectual disability Lubs type Mental retardation, X-linked syndromic, Lubs type 300260
    X-linked intellectual disability-psychosis-macroorchidism syndrome Mental retardation, X-linked, syndromic 13 300055
    {Autism susceptibility, X-linked 3} 300496
    Encephalopathy, neonatal severe 300673
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axonogenesis involved in innervation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 17)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001739 (1)
  • InterPro:IPR016177 (1)
  • InterPro:IPR017353 (1)
  • PROSITE:PS50982 (1)
  • Pfam:PF01429 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mecp2-001 (1) 1684
    mecp2-002 (1) 1673
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mecp2 No data available
    MARKER RELATIONSHIPS
    mecp2Contained in: [BAC] CH211-192F24 (1) (order this), DKEYP-77F7 (1)
    mecp2Encodes: [EST] fk96a04
    [cDNA] MGC:111857 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212736 (1) 1673bp
    Genomic GenBank:BX571687 (1) 173448bp
    Select Tool
    Polypeptide UniProtKB:Q7T2T7 (1) 524aa
    Sequence Clusters UniGene:82151 (1)
    Sequence Information (all 18)
    OTHER mecp2 GENE PAGES
  • Alliance (1)
  • Gene:335250 (1)
  • VEGA:OTTDARG00000020060 (1)
  • Ensembl(GRCz11):ENSDARG00000014218 (2)
  • ORTHOLOGY for mecp2 (Chr: 8)
    CITATIONS (47)