ZFIN ID: ZDB-GENE-030131-4975
Gene Name: cyclin-dependent kinase 13
Gene Symbol: cdk13    Nomenclature History

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Previous Names: cdc2l5, fi49c05, wu:fe16d10, wu:fi49c05

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have several functions, including cyclin binding activity; protein serine/threonine kinase activity; and transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in phosphorylation of RNA polymerase II C-terminal domain; positive regulation of transcription elongation from RNA polymerase II promoter; and transcription elongation from RNA polymerase II promoter. Predicted to localize to cyclin/CDK positive transcription elongation factor complex and nuclear chromatin. Orthologous to human CDK13 (cyclin dependent kinase 13).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000076791 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la022830Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cdk13 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Congenital heart defects, dysmorphic facial features, and intellectual developmental disorder 617360
    DISEASE ASSOCIATED WITH cdk13 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein phosphorylation (more)
    Cellular Component chromosome (more)
    Molecular Function ATP binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cdk13-201 (1)    Ensembl 5121
    ncRNA cdk13-002 (1)    Ensembl 599
    cdk13-003 (1)    Ensembl 834
    Browsers: EnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdk13 No data available
    MARKER RELATIONSHIPS
    cdk13 Contained in: [BAC] DKEY-192L18 (1) (order this)
    cdk13 Contains: [SNP] rs3729303 (1), rs3729304 (1), rs3729305 (1), rs3729306 (1), rs3729307 (1)
    cdk13 Encodes: [EST] fe16d10, fi49c05
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA GenBank:AW116982 (1) 744 nt
    Genomic GenBank:BX005461 (1) 162216 nt
    Select Tool
    Polypeptide UniProtKB:E7F092 (1) 1289 aa
    Sequence Information (all 6)
    ORTHOLOGY for cdk13 ( Chr: 24 )
    CITATIONS (20)