ZFIN ID: ZDB-GENE-030131-3543
Gene Name: actin related protein 6
Gene Symbol: actr6    Nomenclature History

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Previous Names: wu:fc44c08, zgc:56166

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have nucleosome binding activity. Predicted to be involved in histone exchange. Predicted to localize to Swr1 complex. Orthologous to human ACTR6 (actin related protein 6).
Genome Resources: Alliance (1),  Gene:324822 (1),  Ensembl(GRCz11):ENSDARG00000021370 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56166]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023196Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la023197Tg Transgenic Insertion Unknown Unknown DNA
    sa38059 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-actr6 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH actr6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH actr6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chromatin remodeling (more)
    Cellular Component nucleus (more)
    Molecular Function nucleosome binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA actr6-201 (1)    Ensembl 1727
    actr6-203 (1)    Ensembl 548
    ncRNA actr6-003 (1)    Ensembl 773
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM actr6 No data available
    MARKER RELATIONSHIPS
    actr6 Contained in: [BAC] CH211-59O9 (1)
    actr6 Encodes: [EST] fc44c08
    [cDNA] MGC:56166 (1), MGC:191137 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199696 (1) 1696 nt
    Genomic GenBank:CR385081 (1) 182806 nt
    Select Tool
    Polypeptide UniProtKB:F1QVP8 (1) 396 aa
    Sequence Information (all 16)
    ORTHOLOGY for actr6 ( Chr: 25 )
    CITATIONS (23)