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ZIRC
ZFIN ID: ZDB-GENE-030131-2987
Gene Name: HBS1-like translational GTPase
Gene Symbol: hbs1l    Nomenclature History

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Previous Names: wu:fc23c07, zgc:55400

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have GTPase activity. Predicted to be involved in translation. Human ortholog(s) of this gene implicated in beta thalassemia. Orthologous to human HBS1L (HBS1 like translational GTPase).
Genome Resources: Alliance (1),  Gene:324267 (1),  Ensembl(GRCz11):ENSDARG00000036778 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55400]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014406Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8503 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hbs1l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hbs1l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Molecular Function GTPase activity (more)
    GO Terms (all 3)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hbs1l-201 (1)    Ensembl 1204
    hbs1l-203 (1)    Ensembl 2424
    ncRNA hbs1l-003 (1) 643
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hbs1l No data available
    MARKER RELATIONSHIPS
    hbs1l Contained in: [BAC] DKEY-161P7 (1) (order this)
    hbs1l Encodes: [EST] fc23c07
    [cDNA] MGC:55400 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001308548 (1)
    Genomic GenBank:BX927365 (1) 229608 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QJC3 (1) 695 aa
    Sequence Clusters UniGene:9050 (1)
    Sequence Information (all 20)
    ORTHOLOGY for hbs1l ( Chr: 23 )
    CITATIONS (21)